RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 APEHP13798 732 aaKnown RBP13.73□□□□□ -0.21
ATG4B-206ENST00000405546 GK2Q14410 553 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-206ENST00000405546 KCNAB1Q14722 419 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 RBMS2Q15434 407 aaKnown RBP13.73□□□□□ -0.21
ATG4B-206ENST00000405546 KIRREL2Q6UWL6 708 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 SEZ6L2Q6UXD5 910 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 MCATQ8IVS2 390 aaKnown RBP13.73□□□□□ -0.21
ATG4B-206ENST00000405546 DVL3Q92997 716 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-206ENST00000405546 RASD2Q96D21 266 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 ZNF230Q9UIE0 474 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-206ENST00000405546 MCIDASD6RGH6 385 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 AIPO00170 330 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 CLDN4O14493 209 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 CREBL2O60519 120 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-206ENST00000405546 SELENOFO60613 162 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 LDOC1O95751 146 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-206ENST00000405546 ATP1B1P05026 303 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 OVCH2Q7RTZ1 564 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 PRR22Q8IZ63 422 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 SCARB1Q8WTV0 552 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 ZNF75AQ96N20 296 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 TIMP4Q99727 224 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 TRIM2Q9C040 744 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 PRTFDC1Q9NRG1 225 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 POT1Q9NUX5 634 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 ZNF223Q9UK11 482 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-206ENST00000405546 IKZF2Q9UKS7 526 aa13.73□□□□□ -0.21
ATG4B-206ENST00000405546 MRPS33Q9Y291 106 aaKnown RBP13.73□□□□□ -0.21
ATG4B-206ENST00000405546 ASXL3Q9C0F0 2248 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 FLRT2O43155 660 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 NGFRP08138 427 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 POU2F2P09086 479 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 IL9P15248 144 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 PTBP1P26599 531 aaKnown RBP eCLIP13.72□□□□□ -0.216e-9■■■■□ 20.1
ATG4B-206ENST00000405546 ITPKBP27987 946 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 RPS27P42677 84 aaKnown RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 PSG6Q00889 435 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ZNF511Q8NB15 262 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 CPNE2Q96FN4 548 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 UBL7Q96S82 380 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 GABRG3Q99928 467 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 NKX6-2Q9C056 277 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 TMEM185BQ9H7F4 350 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ADGRL4Q9HBW9 690 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 LYRM4Q9HD34 91 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ING1Q9UK53 422 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 LOC100509620A0A075B734 347 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 CDC14CA4D256 554 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 TMEM200CA6NKL6 621 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 DISC1C4P0D8 188 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 H7C1C5 153 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 F13BP05160 661 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 FGF2P09038 288 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 GABRA1P14867 456 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 STARP49675 285 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ARFIP1P53367 373 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 LCN6P62502 163 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 FAM209BQ5JX69 171 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 HAGHLQ6PII5 290 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ZNF563Q8TA94 476 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 C3orf49Q96BT1 292 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 FOXN4Q96NZ1 517 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 LMF1Q96S06 567 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 TSNAXQ99598 290 aaKnown RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 MAP3K3Q99759 626 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 OR8D2Q9GZM6 311 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 MFFQ9GZY8 342 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ZMIZ1Q9ULJ6 1067 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 UNC13CQ8NB66 2214 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ELOA3DA6NLF2 546 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 NDUFB2O95178 105 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 IGKV1D-16P01601 117 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 SMIM10L1P0DMW3 83 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 EPXP11678 715 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ZNF85Q03923 595 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 BAMBIQ13145 260 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 GUCA2BQ16661 112 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ELOA3BQ3SY89 546 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ZNF660Q6AZW8 331 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 RPL13AP3Q6NVV1 102 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ELOA3Q8NG57 546 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 OR4D10Q8NGI6 311 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 FLVCR1-AS1Q8TAF5 88 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 ANKRD9Q96BM1 317 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-206ENST00000405546 SMIM10Q96HG1 83 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 TAS2R10Q9NYW0 307 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 PTTG3PQ9NZH4 202 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 CD207Q9UJ71 328 aa13.72□□□□□ -0.21
ATG4B-206ENST00000405546 C4orf47A7E2U8 309 aa13.71□□□□□ -0.21
ATG4B-206ENST00000405546 CAPZA2P47755 286 aa13.71□□□□□ -0.21
ATG4B-206ENST00000405546 METTL11BQ5VVY1 283 aa13.71□□□□□ -0.21
ATG4B-206ENST00000405546 ARHGAP11AQ6P4F7 1023 aa13.71□□□□□ -0.21
ATG4B-206ENST00000405546 TMPRSS11FQ6ZWK6 438 aa13.71□□□□□ -0.21
ATG4B-206ENST00000405546 TMED4Q7Z7H5 227 aa13.71□□□□□ -0.21
ATG4B-206ENST00000405546 LINC00469Q8N7U9 141 aa13.71□□□□□ -0.21
ATG4B-206ENST00000405546 CRB3Q9BUF7 120 aa13.71□□□□□ -0.21
ATG4B-206ENST00000405546 CHST6Q9GZX3 395 aa13.71□□□□□ -0.21
ATG4B-206ENST00000405546 C2orf16Q68DN1 1984 aa13.71□□□□□ -0.21
ATG4B-206ENST00000405546 CSN2P05814 226 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms