RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 NTF4P34130 210 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 GRK5P34947 590 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 ACVR1BP36896 505 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 KIR2DL2P43627 348 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-201ENST00000404210 BIDP55957 195 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 RAP1BP61224 184 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 RAP1AP62834 184 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 MYBPC1Q00872 1141 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 CLEC12AQ5QGZ9 265 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 SLX4IPQ5VYV7 408 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 MARVELD2Q8N4S9 558 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 OR4Q3Q8NH05 313 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 PRR7Q8TB68 274 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF519Q8TB69 540 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 ASB10Q8WXI3 467 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 RND1Q92730 232 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 SLC25A44Q96H78 314 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-201ENST00000404210 HRASLS5Q96KN8 279 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 LRR1Q96L50 414 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 Q96M85 177 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF570Q96NI8 536 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 TSPAN32Q96QS1 320 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 MBOAT4Q96T53 435 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 PLSCR4Q9NRQ2 329 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 FAM118AQ9NWS6 357 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 MED29Q9NX70 200 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF629Q9UEG4 869 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-201ENST00000404210 CLEC4AQ9UMR7 237 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 RCE1Q9Y256 329 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 EMC9Q9Y3B6 208 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 ADAM18Q9Y3Q7 739 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 POLEQ07864 2286 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 IGSF10Q6WRI0 2623 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 NBEAQ8NFP9 2946 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 BOD1L1Q8NFC6 3051 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 LOC100130705A0A1B0GUX0 176 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 OR6C65A6NJZ3 312 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 TRMUO75648 421 aaKnown RBP10.92□□□□□ -0.66
LINC00339-201ENST00000404210 EPHA2P29317 976 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 OPRM1P35372 400 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 FOXF2Q12947 444 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 PGGHGQ32M88 737 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 C4orf17Q53FE4 359 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF362Q5T0B9 420 aaPredicted RBP10.92□□□□□ -0.66
LINC00339-201ENST00000404210 TMEM236Q5W0B7 351 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 TTC23Q5W5X9 447 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 C12orf73Q69YU5 71 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 MTFR2Q6P444 385 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 NIPAL3Q6P499 406 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 NUFIP2Q7Z417 695 aaKnown RBP10.92□□□□□ -0.66
LINC00339-201ENST00000404210 GCNT2Q8N0V5 402 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 DHRSXQ8N5I4 330 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF555Q8NEP9 628 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 OR6K3Q8NGY3 331 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 STARD4Q96DR4 205 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 SNX18Q96RF0 628 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 EMC6Q9BV81 110 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 SFXN3Q9BWM7 321 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 MRPL13Q9BYD1 178 aaKnown RBP10.92□□□□□ -0.66
LINC00339-201ENST00000404210 KLHL21Q9UJP4 597 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 RALYQ9UKM9 306 aaKnown RBP10.92□□□□□ -0.66
LINC00339-201ENST00000404210 NDRG4Q9ULP0 352 aaKnown RBP10.92□□□□□ -0.66
LINC00339-201ENST00000404210 ALPK2Q86TB3 2170 aa10.92□□□□□ -0.66
LINC00339-201ENST00000404210 MYO7BQ6PIF6 2116 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 A0A0G2JNJ9 132 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 TEX13CA0A0J9YWL9 993 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 H0YAE9 185 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 XKRYO14609 159 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 ARHGEF9O43307 516 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 SLC43A1O75387 559 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 TNFSF13O75888 250 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 CGAP01215 116 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 IGHG1P01857 330 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 HIST1H1CP16403 213 aaKnown RBP10.91□□□□□ -0.66
LINC00339-201ENST00000404210 GGT2P36268 569 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 CDKN2AP42771 156 aaKnown RBP10.91□□□□□ -0.66
LINC00339-201ENST00000404210 OR3A2P47893 321 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 UQCRFS1P47985 274 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 SELENOPP49908 381 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 ADARB1P78563 741 aaKnown RBP10.91□□□□□ -0.66
LINC00339-201ENST00000404210 EFNB1P98172 346 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 TOP3AQ13472 1001 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-201ENST00000404210 CAMK2DQ13557 499 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 KEAP1Q14145 624 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 MELKQ14680 651 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 CASP12Q6UXS9 341 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 FJX1Q86VR8 437 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 C20orf196Q8IYI0 205 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF100Q8IYN0 542 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 TMEM123Q8N131 208 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 IQCF1Q8N6M8 205 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 CNEP1R1Q8N9A8 125 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 NAXEQ8NCW5 288 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 FNDC8Q8TC99 324 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 TRUB1Q8WWH5 349 aaKnown RBP10.91□□□□□ -0.66
LINC00339-201ENST00000404210 HDAC2Q92769 488 aaKnown RBP10.91□□□□□ -0.66
LINC00339-201ENST00000404210 TMEM54Q969K7 222 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF566Q969W8 418 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 SLC38A2Q96QD8 506 aa10.91□□□□□ -0.66
LINC00339-201ENST00000404210 RBP7Q96R05 134 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms