RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 KPNA4O00629 521 aaPredicted RBP13.32□□□□□ -0.28
TPM1-207ENST00000403994 F12P00748 615 aaPredicted RBP13.32□□□□□ -0.28
TPM1-207ENST00000403994 ADORA3P0DMS8 318 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 TROVE2P10155 538 aaKnown RBP eCLIP13.32□□□□□ -0.28
TPM1-207ENST00000403994 B4GALT1P15291 398 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 AHCYP23526 432 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 ARR3P36575 388 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 VLDLRP98155 873 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 HGFACQ04756 655 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 CAMK2DQ13557 499 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 COQ5Q5HYK3 327 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 C6orf52Q5T4I8 152 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 REP15Q6BDI9 236 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 NANOGP8Q6NSW7 305 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 CGB2Q6NT52 195 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 CCDC80Q76M96 950 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 ZNF627Q7L945 461 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 CALHM3Q86XJ0 350 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 CCDC36Q8IYA8 594 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 ANKS4BQ8N8V4 417 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 OR8J3Q8NGG0 315 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 SLC26A7Q8TE54 656 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 TNFRSF13CQ96RJ3 184 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 PLK3Q9H4B4 646 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 ZNF442Q9H7R0 627 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 NANOGQ9H9S0 305 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 B3GAT2Q9NPZ5 323 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 YAE1D1Q9NRH1 226 aa13.32□□□□□ -0.28
TPM1-207ENST00000403994 FBN3Q75N90 2809 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 BBIP1A8MTZ0 92 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 B9A039 149 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 MRASO14807 208 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 CH25HO95992 272 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 HLA-HP01893 362 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 IFNGR1P15260 489 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 CSNK1A1P48729 337 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 PPOXP50336 477 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 BIDP55957 195 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 CYLC2Q14093 348 aaPredicted RBP13.31□□□□□ -0.28
TPM1-207ENST00000403994 ZNF813Q6ZN06 617 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 OR6N1Q8NGY5 312 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 RASSF5Q8WWW0 418 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 LRRC58Q96CX6 371 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 MPP4Q96JB8 637 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 SLC19A3Q9BZV2 496 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 MRGBPQ9NV56 204 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 B3GNT2Q9NY97 397 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 ZNF224Q9NZL3 707 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 ZNF229Q9UJW7 825 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 MALRD1Q5VYJ5 2156 aa13.31□□□□□ -0.28
TPM1-207ENST00000403994 ZNF726A6NNF4 738 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 A8MV72 311 aaPredicted RBP13.3□□□□□ -0.28
TPM1-207ENST00000403994 CD79AP11912 226 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 ZNF16P17020 682 aaPredicted RBP13.3□□□□□ -0.28
TPM1-207ENST00000403994 THBS4P35443 961 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 SF3A3Q12874 501 aaKnown RBP eCLIP13.3□□□□□ -0.289e-9■■■■□ 23.4
TPM1-207ENST00000403994 KLF10Q13118 480 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 SNTB2Q13425 540 aaKnown RBP13.3□□□□□ -0.28
TPM1-207ENST00000403994 GSG1Q2KHT4 349 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 TTC33Q6PID6 262 aaPredicted RBP13.3□□□□□ -0.28
TPM1-207ENST00000403994 SLC35D2Q76EJ3 337 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 SNX32Q86XE0 403 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 LRRC17Q8N6Y2 441 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 PROX1Q92786 737 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 MS4A3Q96HJ5 214 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 MDFIQ99750 246 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 FOXB1Q99853 325 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 VRK1Q99986 396 aaPredicted RBP13.3□□□□□ -0.28
TPM1-207ENST00000403994 PIMREGQ9BSJ6 248 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 SAR1AQ9NR31 198 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 NANSQ9NR45 359 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 TAS2R5Q9NYW4 299 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 POFUT2Q9Y2G5 429 aa13.3□□□□□ -0.28
TPM1-207ENST00000403994 VWC2LB2RUY7 222 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 hCG_2039718K7EN88 272 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 OR6A2O95222 327 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 ASAH2BP0C7U1 165 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 ZNF14P17017 642 aaPredicted RBP13.29□□□□□ -0.28
TPM1-207ENST00000403994 TNFRSF1BP20333 461 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 NPR2P20594 1047 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 USF1P22415 310 aaPredicted RBP13.29□□□□□ -0.28
TPM1-207ENST00000403994 PDLIM4P50479 330 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 ARFIP2P53365 341 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 DAG1Q14118 895 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 MELKQ14680 651 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 MMEL1Q495T6 779 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 KRT80Q6KB66 452 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 NANOGNBQ7Z5D8 188 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 CARM1Q86X55 608 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 SVOPLQ8N434 492 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 OR6X1Q8NH79 312 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 ZNF75AQ96N20 296 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 SH3GL1Q99961 368 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 ECSITQ9BQ95 431 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 PRSS27Q9BQR3 290 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 MYOZ1Q9NP98 299 aaPredicted RBP13.29□□□□□ -0.28
TPM1-207ENST00000403994 MEPEQ9NQ76 525 aaPredicted RBP13.29□□□□□ -0.28
TPM1-207ENST00000403994 ZNF446Q9NWS9 450 aa13.29□□□□□ -0.28
TPM1-207ENST00000403994 NDUFS8O00217 210 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 RNF13O43567 381 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms