RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 HTRA1Q92743 480 aa13.78□□□□□ -0.2
ATG4B-203ENST00000400772 ADAD1Q96M93 576 aaKnown RBP13.78□□□□□ -0.2
ATG4B-203ENST00000400772 REG4Q9BYZ8 158 aa13.78□□□□□ -0.2
ATG4B-203ENST00000400772 BARX1Q9HBU1 254 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-203ENST00000400772 B3GNT2Q9NY97 397 aa13.78□□□□□ -0.2
ATG4B-203ENST00000400772 RIMS3Q9UJD0 308 aa13.78□□□□□ -0.2
ATG4B-203ENST00000400772 ZNF229Q9UJW7 825 aa13.78□□□□□ -0.2
ATG4B-203ENST00000400772 ELOVL7A1L3X0 281 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 H7C417 338 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 ATP8B1O43520 1251 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 SSX4O60224 188 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 OR5F1O95221 314 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 OR6A2O95222 327 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 IFNA14P01570 189 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 COX4I1P13073 169 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 FUT4P22083 530 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 UGT2B15P54855 530 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 BIDP55957 195 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 HGFACQ04756 655 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 C8orf82Q6P1X6 216 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-203ENST00000400772 SLC35D2Q76EJ3 337 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 MDP1Q86V88 176 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 OR10H5Q8NGA6 315 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 OR6X1Q8NH79 312 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 TMEM255BQ8WV15 326 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 TMEM54Q969K7 222 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 ZNF75AQ96N20 296 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 POLR2J2Q9GZM3 115 aaKnown RBP13.77□□□□□ -0.21
ATG4B-203ENST00000400772 POLR2J3Q9H1A7 115 aaKnown RBP13.77□□□□□ -0.21
ATG4B-203ENST00000400772 C20orf141Q9NUB4 165 aa13.77□□□□□ -0.21
ATG4B-203ENST00000400772 NIPBLQ6KC79 2804 aaeCLIP13.76□□□□□ -0.21
ATG4B-203ENST00000400772 RNF13O43567 381 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 CCDC22O60826 627 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 CRYAAP02489 173 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 MT-ND1P03886 318 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 ARR3P36575 388 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 RBM34P42696 430 aaKnown RBP13.76□□□□□ -0.21
ATG4B-203ENST00000400772 IDH3GP51553 393 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-203ENST00000400772 TAS2R41P59536 307 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 SELENOWP63302 87 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 RAB35Q15286 201 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 LRRC23Q53EV4 343 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-203ENST00000400772 CCDC36Q8IYA8 594 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 OR6N1Q8NGY5 312 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 ULBP2Q9BZM5 246 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 NOX3Q9HBY0 568 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 MOV10Q9HCE1 1003 aaKnown RBP13.76□□□□□ -0.21
ATG4B-203ENST00000400772 CA10Q9NS85 328 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 ZNF224Q9NZL3 707 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 POFUT2Q9Y2G5 429 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 ARFGEF3Q5TH69 2177 aa13.76□□□□□ -0.21
ATG4B-203ENST00000400772 CR1P17927 2039 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 IGHV4-30-2A0A087WSY4 118 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 A0A096LNT2 108 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 NME4O00746 187 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 OR7A10O76100 309 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 IGF2P01344 180 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 HLA-HP01893 362 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 UMPSP11172 480 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 FUT1P19526 365 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 SERPINF1P36955 418 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 CSNK1A1P48729 337 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 SEC24CP53992 1094 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 LIPEQ05469 1076 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 MELKQ14680 651 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 ADIPOQQ15848 244 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 LRFN4Q6PJG9 635 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 ZNF813Q6ZN06 617 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 TMEM239Q8WW34 195 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 LIPHQ8WWY8 451 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 FBXO17Q96EF6 278 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 TPD52L3Q96J77 140 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 FOXB1Q99853 325 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 KCNS3Q9BQ31 491 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 MYLK2Q9H1R3 596 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 B3GAT2Q9NPZ5 323 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 GLTPQ9NZD2 209 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 A4GNTQ9UNA3 340 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 AP3M1Q9Y2T2 418 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 ZANQ9Y493 2812 aa13.75□□□□□ -0.21
ATG4B-203ENST00000400772 NAV3Q8IVL0 2385 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 IGHV2OR16-5A0A0B4J2B6 119 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 BLOC1S5-TXNDC5H3BN57 136 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 HIST1H2ABP04908 130 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 OR4A8P0C604 315 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 TSPAN19P0C672 248 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 THRBP10828 461 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 B4GALT1P15291 398 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 CAPZA2P47755 286 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 NUDT6P53370 316 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 LSM11P83369 360 aaKnown RBP eCLIP13.74□□□□□ -0.21
ATG4B-203ENST00000400772 CHRNB3Q05901 458 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 RUNX1T1Q06455 604 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 RPL18Q07020 188 aaKnown RBP13.74□□□□□ -0.21
ATG4B-203ENST00000400772 NPRL3Q12980 569 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 VHLLQ6RSH7 139 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 HIST3H2AQ7L7L0 130 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 ARPINQ7Z6K5 226 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 VTCN1Q7Z7D3 282 aa13.74□□□□□ -0.21
ATG4B-203ENST00000400772 ZNF525Q8N782 197 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms