RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 SPATC1Q76KD6 591 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 RNF113BQ8IZP6 322 aaKnown RBP10.47□□□□□ -0.73
SKA3-203ENST00000400018 C7orf57Q8NEG2 295 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 OR6K6Q8NGW6 343 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 MED30Q96HR3 178 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 NPIPA1Q9UND3 350 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 NDUFB2O95178 105 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 HIST1H2ABP04908 130 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 ZNF91Q05481 1191 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 COX10Q12887 443 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 OR2G6Q5TZ20 316 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 KCTD8Q6ZWB6 473 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 HIST3H2AQ7L7L0 130 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 MISPQ8IVT2 679 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 SLC37A3Q8NCC5 494 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 ABHD3Q8WU67 409 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 TRUB1Q8WWH5 349 aaKnown RBP10.47□□□□□ -0.73
SKA3-203ENST00000400018 NSMAFQ92636 917 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 HIST1H2ACQ93077 130 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 ZNF385AQ96PM9 386 aaKnown RBP10.47□□□□□ -0.73
SKA3-203ENST00000400018 B3GNT4Q9C0J1 378 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 ABI3Q9P2A4 366 aa10.47□□□□□ -0.73
SKA3-203ENST00000400018 LIPT2A6NK58 231 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 PLPP3O14495 311 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 NME2P1O60361 137 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 HCN1O60741 890 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 HSMCR30P0CW71 290 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 GSTM3P21266 225 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 NME2P22392 152 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 RBM34P42696 430 aaKnown RBP10.46□□□□□ -0.73
SKA3-203ENST00000400018 LSM3P62310 102 aaKnown RBP10.46□□□□□ -0.73
SKA3-203ENST00000400018 PLEKHN1Q494U1 663 aaPredicted RBP10.46□□□□□ -0.73
SKA3-203ENST00000400018 C9orf135Q5VTT2 229 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 JMJD6Q6NYC1 403 aaPredicted RBP10.46□□□□□ -0.73
SKA3-203ENST00000400018 C3orf33Q6P1S2 294 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 CXXC5Q7LFL8 322 aaKnown RBP10.46□□□□□ -0.73
SKA3-203ENST00000400018 LRRC75AQ8NAA5 344 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 ST8SIA1Q92185 356 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 HAS2Q92819 552 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 OSTF1Q92882 214 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 RDH12Q96NR8 316 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 OR5M11Q96RB7 305 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 FAM173AQ9BQD7 235 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 COPS4Q9BT78 406 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 TMEM43Q9BTV4 400 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 LDAHQ9H6V9 325 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 SPRR3Q9UBC9 169 aa10.46□□□□□ -0.73
SKA3-203ENST00000400018 NPIPA2E9PIF3 369 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 NPIPA3F8WFD2 350 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 SELENOFO60613 162 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 SNX4O95219 450 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 UQCRC1P31930 480 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 APOBEC1P41238 236 aaKnown RBP10.46□□□□□ -0.74
SKA3-203ENST00000400018 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.46□□□□□ -0.74
SKA3-203ENST00000400018 SOWAHCQ53LP3 525 aaPredicted RBP10.46□□□□□ -0.74
SKA3-203ENST00000400018 CEP78Q5JTW2 689 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 EEF1A1P5Q5VTE0 462 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 CD300LDQ6UXZ3 194 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 GGNQ86UU5 652 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 DEPDC4Q8N2C3 294 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 OR5J2Q8NH18 312 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 ZNF837Q96EG3 531 aaPredicted RBP10.46□□□□□ -0.74
SKA3-203ENST00000400018 MRGPRX4Q96LA9 322 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 B3GAT1Q9P2W7 334 aa10.46□□□□□ -0.74
SKA3-203ENST00000400018 CRNNQ9UBG3 495 aaPredicted RBP10.46□□□□□ -0.74
SKA3-203ENST00000400018 IGLV3-32A0A0A0MS00 114 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 OR6A2O95222 327 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 PTHP01270 115 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 CD46P15529 392 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 HOXB6P17509 224 aaKnown RBP10.45□□□□□ -0.74
SKA3-203ENST00000400018 POU3F2P20265 443 aaPredicted RBP10.45□□□□□ -0.74
SKA3-203ENST00000400018 GTF2E2P29084 291 aaKnown RBP10.45□□□□□ -0.74
SKA3-203ENST00000400018 IDUAP35475 653 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 ACVR1BP36896 505 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 RPS4XP62701 263 aaKnown RBP10.45□□□□□ -0.74
SKA3-203ENST00000400018 EFNB1P98172 346 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 TMEM225Q6GV28 225 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 SSX6Q7RTT6 188 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 SPARTQ8N0X7 666 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 DDIT4LQ96D03 193 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 TMEM41AQ96HV5 264 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 IP6K3Q96PC2 410 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 MROQ9BYG7 248 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 NUAK2Q9H093 628 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 SH3BGRL2Q9UJC5 107 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 AQP8O94778 261 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 RCBTB2O95199 551 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 DBTP11182 482 aaKnown RBP10.45□□□□□ -0.74
SKA3-203ENST00000400018 LCN1P31025 176 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 CDAP32320 146 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 CDH11P55287 796 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 BIDP55957 195 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 SLC35A2P78381 396 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 EMX1Q04741 257 aaPredicted RBP10.45□□□□□ -0.74
SKA3-203ENST00000400018 UBE2UQ5VVX9 321 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 XAF1Q6GPH4 301 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 FAM122BQ7Z309 247 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 OR6V1Q8N148 313 aa10.45□□□□□ -0.74
SKA3-203ENST00000400018 GTPBP8Q8N3Z3 284 aaPredicted RBP10.45□□□□□ -0.74
SKA3-203ENST00000400018 LNX2Q8N448 690 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms