RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 CRYBA2P53672 197 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 CAMK2DQ13557 499 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 ZNF74Q16587 644 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 PHYHD1Q5SRE7 291 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 CLEC2AQ6UVW9 174 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 OR4F15Q8NGB8 312 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 OR6N1Q8NGY5 312 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 HTRA1Q92743 480 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 FBXO17Q96EF6 278 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 TXNDC15Q96J42 360 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 ULBP2Q9BZM5 246 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 SLC19A3Q9BZV2 496 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 CCDC134Q9H6E4 229 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 NANSQ9NR45 359 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 CA10Q9NS85 328 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 SH3GLB1Q9Y371 365 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 CAPN7Q9Y6W3 813 aa11.66□□□□□ -0.54
VCX3A-202ENST00000398729 KPNA4O00629 521 aaPredicted RBP11.65□□□□□ -0.54
VCX3A-202ENST00000398729 SLC22A2O15244 555 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 SEC14L2O76054 403 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 HIST1H2ABP04908 130 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 ARR3P36575 388 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 SERPINF1P36955 418 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 BIDP55957 195 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 SNRPD2P62316 118 aaKnown RBP11.65□□□□□ -0.54
VCX3A-202ENST00000398729 NPRL3Q12980 569 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 SWI5Q1ZZU3 235 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 VHLLQ6RSH7 139 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 NHLRC1Q6VVB1 395 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 HIST3H2AQ7L7L0 130 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 TSPYL5Q86VY4 417 aaPredicted RBP11.65□□□□□ -0.54
VCX3A-202ENST00000398729 CARM1Q86X55 608 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 IL17RDQ8NFM7 739 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 OR10H5Q8NGA6 315 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 C10orf82Q8WW14 230 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 HIST1H2ACQ93077 130 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 ZNF583Q96ND8 569 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 ZNF426Q9BUY5 554 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 MED4Q9NPJ6 270 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 ZNF229Q9UJW7 825 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 USP22Q9UPT9 525 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 POFUT2Q9Y2G5 429 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 CR1P17927 2039 aa11.65□□□□□ -0.54
VCX3A-202ENST00000398729 IGHV4-30-2A0A087WSY4 118 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 VSTM5A8MXK1 200 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 FAM220BPB1ANY3 271 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 RNF13O43567 381 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 PDE5AO76074 875 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 CELA3BP08861 270 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 CSF3P09919 207 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 UMPSP11172 480 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 IFNGR1P15260 489 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 CALCRP30988 508 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 CSNK1A1P48729 337 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 EFNA4P52798 201 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 TAS2R41P59536 307 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 ZP4Q12836 540 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 MST1LQ2TV78 715 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 ZNF813Q6ZN06 617 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 DEF8Q6ZN54 512 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 ZNF627Q7L945 461 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 MDP1Q86V88 176 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 ZNF525Q8N782 197 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 NUP37Q8NFH4 326 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 OR6X1Q8NH79 312 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 FAM168AQ92567 244 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 FOXB1Q99853 325 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 PRSS27Q9BQR3 290 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 POLR2J2Q9GZM3 115 aaKnown RBP11.64□□□□□ -0.55
VCX3A-202ENST00000398729 POLR2J3Q9H1A7 115 aaKnown RBP11.64□□□□□ -0.55
VCX3A-202ENST00000398729 SEC61A2Q9H9S3 476 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 TAS2R5Q9NYW4 299 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 FKBP7Q9Y680 259 aa11.64□□□□□ -0.55
VCX3A-202ENST00000398729 ZNF503-AS2A6NEH8 195 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 B9A039 149 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 OR5F1O95221 314 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 OR4A8P0C604 315 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 ASAH2BP0C7U1 165 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 CD79AP11912 226 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 TNFRSF1BP20333 461 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 MDH1P40925 334 aaKnown RBP11.63□□□□□ -0.55
VCX3A-202ENST00000398729 RBM34P42696 430 aaKnown RBP11.63□□□□□ -0.55
VCX3A-202ENST00000398729 GSG1Q2KHT4 349 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 LRRC23Q53EV4 343 aaPredicted RBP11.63□□□□□ -0.55
VCX3A-202ENST00000398729 SLC35D2Q76EJ3 337 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 SLC46A3Q7Z3Q1 461 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 NANOGNBQ7Z5D8 188 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 MYPOPQ86VE0 399 aaPredicted RBP11.63□□□□□ -0.55
VCX3A-202ENST00000398729 HIPK1Q86Z02 1210 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 WDFY1Q8IWB7 410 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 LRRC17Q8N6Y2 441 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 OR2T12Q8NG77 320 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 RP9Q8TA86 221 aaKnown RBP11.63□□□□□ -0.55
VCX3A-202ENST00000398729 ZNF442Q9H7R0 627 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 MEPEQ9NQ76 525 aaPredicted RBP11.63□□□□□ -0.55
VCX3A-202ENST00000398729 B3GNT2Q9NY97 397 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 ARMCX1Q9P291 453 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 RIMS3Q9UJD0 308 aa11.63□□□□□ -0.55
VCX3A-202ENST00000398729 FBXO9Q9UK97 447 aaPredicted RBP11.63□□□□□ -0.55
VCX3A-202ENST00000398729 AP3M1Q9Y2T2 418 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms