RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TRAF3IP2O43734 574 aaPredicted RBP18.89■□□□□ 0.61
CPNE1-204ENST00000397443 APOL3O95236 402 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 TXNDC12O95881 172 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 CLDN17P56750 224 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 LY6DQ14210 128 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 OCLNQ16625 522 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 PRR30Q53SZ7 412 aaPredicted RBP18.89■□□□□ 0.61
CPNE1-204ENST00000397443 EMC4Q5J8M3 183 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 RBM48Q5RL73 367 aaKnown RBP18.89■□□□□ 0.61
CPNE1-204ENST00000397443 CARD17Q5XLA6 110 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 OR9K2Q8NGE7 335 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 ZNF519Q8TB69 540 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 ASB10Q8WXI3 467 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 SYT4Q9H2B2 425 aa18.89■□□□□ 0.61
CPNE1-204ENST00000397443 A0A1B0GVC2 190 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 FAM171A2A8MVW0 826 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 IGHMP01871 453 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 CPN1P15169 458 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 CDH11P55287 796 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 CAMK2DQ13557 499 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 SLC17A1Q14916 467 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 TMEM201Q5SNT2 666 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 ARMC4Q5T2S8 1044 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 AADACL4Q5VUY2 407 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 AHSA2Q719I0 299 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 PM20D2Q8IYS1 436 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 ZNF385AQ96PM9 386 aaKnown RBP18.88■□□□□ 0.61
CPNE1-204ENST00000397443 SLC25A18Q9H1K4 315 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 PAK1IP1Q9NWT1 392 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-204ENST00000397443 SCN3BQ9NY72 215 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 MCTS1Q9ULC4 181 aaKnown RBP18.88■□□□□ 0.61
CPNE1-204ENST00000397443 GTF3C1Q12789 2109 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 SLC35F4A4IF30 521 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 MAGEA13PA6NCF6 341 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 KDM4EB2RXH2 506 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-204ENST00000397443 AQP8O94778 261 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 VAMP5O95183 116 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 RASGEF1BQ0VAM2 473 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 APOFQ13790 326 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 MEDAGQ5VYS4 303 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 NXNL2Q5VZ03 156 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 SARAFQ96BY9 339 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 GPR137Q96N19 417 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 SRA1Q9HD15 236 aaKnown RBP18.88■□□□□ 0.61
CPNE1-204ENST00000397443 FANCFQ9NPI8 374 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 PLSCR2Q9NRY7 297 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 ASB6Q9NWX5 421 aa18.88■□□□□ 0.61
CPNE1-204ENST00000397443 CLCA1A8K7I4 914 aa18.87■□□□□ 0.61
CPNE1-204ENST00000397443 PRODHO43272 600 aa18.87■□□□□ 0.61
CPNE1-204ENST00000397443 CCDC159P0C7I6 412 aa18.87■□□□□ 0.61
CPNE1-204ENST00000397443 ZNF91Q05481 1191 aa18.87■□□□□ 0.61
CPNE1-204ENST00000397443 NIPAL3Q6P499 406 aa18.87■□□□□ 0.61
CPNE1-204ENST00000397443 BLOC1S6Q9UL45 172 aa18.87■□□□□ 0.61
CPNE1-204ENST00000397443 CLEC4AQ9UMR7 237 aa18.87■□□□□ 0.61
CPNE1-204ENST00000397443 TPRKBQ9Y3C4 175 aa18.87■□□□□ 0.61
CPNE1-204ENST00000397443 USP24Q9UPU5 2620 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 PRSS37A4D1T9 235 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 SH3D21A4FU49 640 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 RENP00797 406 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 ATP6V1B1P15313 513 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 CXCR4P61073 352 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 SLC25A30Q5SVS4 291 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 NHLRC1Q6VVB1 395 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 CREB3L2Q70SY1 520 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 SHFQ7M4L6 423 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 GGHQ92820 318 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 SNRNP40Q96DI7 357 aaKnown RBP18.86■□□□□ 0.61
CPNE1-204ENST00000397443 DDOQ99489 341 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 CCDC90BQ9GZT6 254 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 ZNF696Q9H7X3 374 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 PAQR5Q9NXK6 330 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-204ENST00000397443 DCTN6O00399 190 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 DBTP11182 482 aaKnown RBP18.86■□□□□ 0.61
CPNE1-204ENST00000397443 PYCR1P32322 319 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 ABLIM2Q6H8Q1 611 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 FGD2Q7Z6J4 655 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 ADCK1Q86TW2 530 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 FAR1Q8WVX9 515 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 ZNRF4Q8WWF5 429 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 ZNF566Q969W8 418 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 RNFT2Q96EX2 444 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 FOXN4Q96NZ1 517 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 PRDM14Q9GZV8 571 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 ERVK-18Q9QC07 812 aa18.86■□□□□ 0.61
CPNE1-204ENST00000397443 LOC102725191A0A1B0GVB3 256 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 ZNF726A6NNF4 738 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 ZNF716A6NP11 495 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 CYTIPO60759 359 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 TRMUO75648 421 aaKnown RBP18.85■□□□□ 0.61
CPNE1-204ENST00000397443 SPI1P17947 270 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 TEKQ02763 1124 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 FMODQ06828 376 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 KCTD21Q4G0X4 260 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 ZNF585AQ6P3V2 769 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 MEPCEQ7L2J0 689 aaKnown RBP18.85■□□□□ 0.61
CPNE1-204ENST00000397443 GID4Q8IVV7 300 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 TSPAN14Q8NG11 270 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 OR6K6Q8NGW6 343 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 RFKQ969G6 155 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 CNTNAP3BQ96NU0 1288 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms