RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PRKCAP17252 672 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 PAICSP22234 425 aaKnown RBP13.41□□□□□ -0.26
CAPN3-207ENST00000397200 TCEA1P23193 301 aaKnown RBP13.41□□□□□ -0.26
CAPN3-207ENST00000397200 NOS3P29474 1203 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 RPS19P39019 145 aaKnown RBP13.41□□□□□ -0.26
CAPN3-207ENST00000397200 PPIAP62937 165 aaKnown RBP13.41□□□□□ -0.26
CAPN3-207ENST00000397200 PMP22Q01453 160 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 OXA1LQ15070 435 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 HYAL4Q2M3T9 481 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 PLPPR5Q32ZL2 321 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 PLEKHN1Q494U1 663 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-207ENST00000397200 VASNQ6EMK4 673 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 CCDC190Q86UF4 302 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 ARIH2OSQ8N7S6 290 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 MINDY2Q8NBR6 621 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 OR51G2Q8NGK0 314 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 PNPLA2Q96AD5 504 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 ZBTB8AQ96BR9 441 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 ZNF524Q96C55 264 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 TEAD3Q99594 435 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 C6orf62Q9GZU0 229 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-207ENST00000397200 LHX6Q9UPM6 363 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 ZNF337Q9Y3M9 751 aa13.41□□□□□ -0.26
CAPN3-207ENST00000397200 IQCMA0A1B0GVH7 501 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 C12orf71A8MTZ7 269 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 S100A5P33763 92 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 EIF1P41567 113 aaKnown RBP13.4□□□□□ -0.26
CAPN3-207ENST00000397200 HTR3AP46098 478 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 FOXF1Q12946 379 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 GPR50Q13585 617 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 GGTLC2Q14390 218 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 RPUSD3Q6P087 351 aaKnown RBP13.4□□□□□ -0.26
CAPN3-207ENST00000397200 DPY19L2P2Q6ZN68 376 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 GRINAQ7Z429 371 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 TMEM251Q8N6I4 163 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 OR14L1PQ8NHC6 308 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 SPRYD4Q8WW59 207 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-207ENST00000397200 SLC25A46Q96AG3 418 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 MRGPRX4Q96LA9 322 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 WDFY2Q96P53 400 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 ADAM19Q9H013 955 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 SLC25A18Q9H1K4 315 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 ADGRL4Q9HBW9 690 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 SMURF1Q9HCE7 757 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 ASB6Q9NWX5 421 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 CRNNQ9UBG3 495 aaPredicted RBP13.4□□□□□ -0.26
CAPN3-207ENST00000397200 HIF3AQ9Y2N7 669 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 MRPS18CQ9Y3D5 142 aaKnown RBP13.4□□□□□ -0.26
CAPN3-207ENST00000397200 FREM3P0C091 2139 aa13.4□□□□□ -0.26
CAPN3-207ENST00000397200 ZC3H12DA2A288 527 aaKnown RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 MCIDASD6RGH6 385 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 ETV2O00321 342 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 MAGEB3O15480 346 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 UPK1BO75841 260 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 SBK2P0C263 348 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 ZNF24P17028 368 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 TACR3P29371 465 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 MAGEA5P43359 124 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 POLR2HP52434 150 aaKnown RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 FABP5Q01469 135 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 POU4F2Q12837 409 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 GALEQ14376 348 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 ZNF74Q16587 644 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 GLYR1Q49A26 553 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 SLC25A53Q5H9E4 307 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 RAET1LQ5VY80 246 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 FAM109AQ8N4B1 249 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 TMEM99Q8N816 258 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 FAM83FQ8NEG4 500 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 DDOQ99489 341 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 OR2B2Q9GZK3 357 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 NRIP3Q9NQ35 241 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 QPCTLQ9NXS2 382 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 LUZP4Q9P127 313 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 RPH3AQ9Y2J0 694 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 UGT2A1Q9Y4X1 527 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 ATMQ13315 3056 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 SLC35F4A4IF30 521 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 ELOA3DA6NLF2 546 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 SHISA8B8ZZ34 492 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 TFECO14948 347 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 IDH3BO43837 385 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 ZIC3O60481 467 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 HPNP05981 417 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 APEHP13798 732 aaKnown RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 CXCR1P25024 350 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 ADH6P28332 368 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 APOBEC1P41238 236 aaKnown RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 CAPZA2P47755 286 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 RORCP51449 518 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 DLX5P56178 289 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 PRPS1P60891 318 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 ZNF181Q2M3W8 571 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 ELOA3BQ3SY89 546 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 RNFT1Q5M7Z0 435 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 POMZP3Q6PJE2 187 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 TMPRSS11AQ6ZMR5 421 aa13.39□□□□□ -0.27
CAPN3-207ENST00000397200 YRDCQ86U90 279 aaKnown RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 GTPBP8Q8N3Z3 284 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-207ENST00000397200 LRRC17Q8N6Y2 441 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms