RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 MUL1Q969V5 352 aa6.65□□□□□ -1.34
UPF2-203ENST00000397053 REEP6Q96HR9 211 aa6.65□□□□□ -1.34
UPF2-203ENST00000397053 TMEM208Q9BTX3 173 aa6.65□□□□□ -1.34
UPF2-203ENST00000397053 FUNDC2Q9BWH2 189 aa6.65□□□□□ -1.34
UPF2-203ENST00000397053 ACPTQ9BZG2 426 aa6.65□□□□□ -1.34
UPF2-203ENST00000397053 OR11A1Q9GZK7 315 aa6.65□□□□□ -1.34
UPF2-203ENST00000397053 TXNL4BQ9NX01 149 aaKnown RBP6.65□□□□□ -1.34
UPF2-203ENST00000397053 MOKQ9UQ07 419 aa6.65□□□□□ -1.34
UPF2-203ENST00000397053 RAB40ALP0C0E4 278 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 SLC35E2P0CK97 266 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 ACP2P11117 423 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 GMPRP36959 345 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 GABARAPL2P60520 117 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 PAGE3Q5JUK9 113 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 RPL22L1Q6P5R6 122 aaKnown RBP6.65□□□□□ -1.35
UPF2-203ENST00000397053 FJX1Q86VR8 437 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 ABHD11Q8NFV4 315 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 CA5BP1Q8WTZ4 195 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 RAB40AQ8WXH6 277 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 TFAP2CQ92754 450 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 TMEM106AQ96A25 262 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 RTP4Q96DX8 246 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 CNTNAP3Q9BZ76 1288 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 SLC6A17Q9H1V8 727 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 CPNE5Q9HCH3 593 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 PTTG3PQ9NZH4 202 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 CACNG2Q9Y698 323 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 BCORL1Q5H9F3 1711 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 E7ESA3 106 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 H0Y8G0 127 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 HBE1P02100 147 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 MT-ND4P03905 459 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 OR8U8P0C7N1 319 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 FKBP2P26885 142 aaKnown RBP6.65□□□□□ -1.35
UPF2-203ENST00000397053 OPRD1P41143 372 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 GIPRP48546 466 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 SNRPD2P62316 118 aaKnown RBP6.65□□□□□ -1.35
UPF2-203ENST00000397053 SLC35A2P78381 396 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 TEKQ02763 1124 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 TESK1Q15569 626 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 THNSL2Q86YJ6 484 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 RNF113BQ8IZP6 322 aaKnown RBP6.65□□□□□ -1.35
UPF2-203ENST00000397053 DTWD1Q8N5C7 304 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 ARFGAP1Q8N6T3 406 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 COMMD5Q9GZQ3 224 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 RNF32Q9H0A6 362 aa6.65□□□□□ -1.35
UPF2-203ENST00000397053 A0A0D9SG52 128 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 KIR2DS1A0A191URI9 304 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 KRBA1A5PL33 1030 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 A6NIN4 97 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 TMEM212A6NML5 194 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 NME4O00746 187 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 AQP7O14520 342 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 ARPC3O15145 178 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 SNRNP70P08621 437 aaKnown RBP6.64□□□□□ -1.35
UPF2-203ENST00000397053 SRFP11831 508 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 ACKR3P25106 362 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 SLC19A1P41440 591 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 KIR2DS4P43632 304 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 FABP6P51161 128 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 RPS16P62249 146 aaKnown RBP6.64□□□□□ -1.35
UPF2-203ENST00000397053 MFGE8Q08431 387 aaPredicted RBP6.64□□□□□ -1.35
UPF2-203ENST00000397053 KIR2DS1Q14954 304 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 ELAVL1Q15717 326 aaKnown RBP6.64□□□□□ -1.35
UPF2-203ENST00000397053 H2BFWTQ7Z2G1 175 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 GIMAP1Q8WWP7 306 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 GGHQ92820 318 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 EGLN2Q96KS0 407 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 TECTBQ96PL2 329 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 THAP7Q9BT49 309 aaPredicted RBP6.64□□□□□ -1.35
UPF2-203ENST00000397053 SLC2A8Q9NY64 477 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 VAPAQ9P0L0 249 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 NKX1-2Q9UD57 310 aaPredicted RBP6.64□□□□□ -1.35
UPF2-203ENST00000397053 HS3ST2Q9Y278 367 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 NCOR1O75376 2440 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 ADGRB2O60241 1585 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 I6L893 689 aaPredicted RBP6.64□□□□□ -1.35
UPF2-203ENST00000397053 TNFRSF10CO14798 259 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 CACNG3O60359 315 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 HTR2CP28335 458 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 CD1CP29017 333 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 FCER1GP30273 86 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 SSTR4P31391 388 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 HOXD13P35453 343 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 GK2Q14410 553 aaPredicted RBP6.64□□□□□ -1.35
UPF2-203ENST00000397053 RAB35Q15286 201 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 YIF1BQ5BJH7 314 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 FCRLAQ7L513 359 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 SERPINA11Q86U17 422 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 FBXL14Q8N1E6 418 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 DPF1Q92782 380 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 ELF4Q99607 663 aaPredicted RBP6.64□□□□□ -1.35
UPF2-203ENST00000397053 HRH4Q9H3N8 390 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 ZCCHC4Q9H5U6 513 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 IKZF5Q9H5V7 419 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 C6orf106Q9H6K1 298 aaPredicted RBP6.64□□□□□ -1.35
UPF2-203ENST00000397053 NPFFR2Q9Y5X5 522 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 NUBP2Q9Y5Y2 271 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 KCPQ6ZWJ8 1503 aa6.64□□□□□ -1.35
UPF2-203ENST00000397053 MEIKINA0A087WXM9 373 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms