RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 LYRM4Q9HD34 91 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 MED9Q9NWA0 146 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 ARID1BQ8NFD5 2236 aaPredicted RBP12.66□□□□□ -0.38
NUP98-204ENST00000397004 A0A1B0GTQ1 180 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 SNRPGP15A8MWD9 76 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 H7C417 338 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 PLRG1O43660 514 aaKnown RBP12.66□□□□□ -0.38
NUP98-204ENST00000397004 F13BP05160 661 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 TLX1P31314 330 aaPredicted RBP12.66□□□□□ -0.38
NUP98-204ENST00000397004 ART1P52961 327 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 EGR4Q05215 589 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 ERV3-1Q14264 604 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 ULK3Q6PHR2 472 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 LRRC69Q6ZNQ3 347 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 ZNF761Q86XN6 746 aaPredicted RBP12.66□□□□□ -0.38
NUP98-204ENST00000397004 SLC35F3Q8IY50 421 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 ARHGEF39Q8N4T4 335 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 OR51D1Q8NGF3 324 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 OR51S1Q8NGJ8 323 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 OR2M4Q96R27 311 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 ARL6Q9H0F7 186 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 MTFP1Q9UDX5 166 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 COLEC10Q9Y6Z7 277 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 FXYD6-FXYD2A0A087WZ82 144 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 TUBAL3A6NHL2 446 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 OR4C45A6NMZ5 311 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 ARPC3O15145 178 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 RDH16O75452 317 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 GLCEO94923 617 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 AKR7A3O95154 331 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 FBXO45P0C2W1 286 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 CT45A8P0DMV1 189 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 CT45A9P0DMV2 189 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 CT45A2Q5DJT8 189 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 FAM74A1Q5RGS3 127 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 TMEM205Q6UW68 189 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 ENPP7Q6UWV6 458 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 MARC2Q969Z3 335 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 FXYD6Q9H0Q3 95 aa12.66□□□□□ -0.38
NUP98-204ENST00000397004 ACOT7O00154 380 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 GOSR2O14653 212 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 MPGP29372 298 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 RUNX3Q13761 415 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 DEFB110Q30KQ9 67 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 Q499Y3 187 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 SAMD14Q8IZD0 417 aaPredicted RBP12.65□□□□□ -0.38
NUP98-204ENST00000397004 GATSQ8NAP1 163 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 GINS4Q9BRT9 223 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 C14orf105Q9NVL8 296 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 ACTR10Q9NZ32 417 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 BLOC1S5-TXNDC5H3BN57 136 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 K7EQS6 105 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 SULT1B1O43704 296 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 RAD1O60671 282 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 WNT11O96014 354 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 CD3DP04234 171 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 CALCBP10092 127 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 MNDAP41218 407 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 CBLN3Q6UW01 205 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 OR2AK2Q8NG84 335 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 RTN4RQ9BZR6 473 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 BARX1Q9HBU1 254 aaPredicted RBP12.65□□□□□ -0.38
NUP98-204ENST00000397004 SRA1Q9HD15 236 aaKnown RBP12.65□□□□□ -0.38
NUP98-204ENST00000397004 PCNX3Q9H6A9 2034 aa12.65□□□□□ -0.38
NUP98-204ENST00000397004 TRBV5-7A0A0A0MS05 114 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 CTAG2O75638 210 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 COL9A1P20849 921 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 KIR2DL1P43626 348 aaPredicted RBP12.65□□□□□ -0.39
NUP98-204ENST00000397004 KIR3DL2P43630 455 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 CAPZA2P47755 286 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 ILF3Q12906 894 aaKnown RBP eCLIP12.65□□□□□ -0.397e-12■■■■■ 47.5
NUP98-204ENST00000397004 ALKBH1Q13686 389 aaKnown RBP12.65□□□□□ -0.39
NUP98-204ENST00000397004 CD226Q15762 336 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 B3GNTL1Q67FW5 361 aaPredicted RBP12.65□□□□□ -0.39
NUP98-204ENST00000397004 ZCCHC12Q6PEW1 402 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 OR9A4Q8NGU2 314 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 SCARB1Q8WTV0 552 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 BMFQ96LC9 184 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 FOXN4Q96NZ1 517 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 LMF2Q9BU23 707 aaKnown RBP12.65□□□□□ -0.39
NUP98-204ENST00000397004 TRIM2Q9C040 744 aa12.65□□□□□ -0.39
NUP98-204ENST00000397004 XRCC3O43542 346 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 HPP00738 406 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 NR0B2Q15466 257 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 FAM131CQ96AQ9 280 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 ZNF578Q96N58 590 aaPredicted RBP12.64□□□□□ -0.39
NUP98-204ENST00000397004 ZFYVE21Q9BQ24 234 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 LINC01553A4QN01 128 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 HMSDA8MTL9 139 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 PDCD5O14737 125 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 EIF4E2O60573 245 aaKnown RBP12.64□□□□□ -0.39
NUP98-204ENST00000397004 SPDEFO95238 335 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 RAB40ALP0C0E4 278 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 ACTR1BP42025 376 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 ACTR1AP61163 376 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 ZNF141Q15928 474 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 EID2Q8N6I1 236 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 OR5M9Q8NGP3 310 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 OR5AK2Q8NH90 309 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms