RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 IFNA16P05015 189 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 LINC00303Q3SY05 128 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 LIPNQ5VXI9 398 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 RGS7BPQ6MZT1 257 aaPredicted RBP18.77■□□□□ 0.6
CLK3-202ENST00000395066 ARSKQ6UWY0 536 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 STAC2Q6ZMT1 411 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 EID2Q8N6I1 236 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 LSM14AQ8ND56 463 aaKnown RBP18.77■□□□□ 0.6
CLK3-202ENST00000395066 PMM1Q92871 262 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 FRRS1LQ9P0K9 344 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 MRM2Q9UI43 246 aaKnown RBP18.77■□□□□ 0.6
CLK3-202ENST00000395066 FOXJ3Q9UPW0 622 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 CLDN16Q9Y5I7 305 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 B4DGG1 531 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 MCRIP1C9JLW8 97 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 CREBL2O60519 120 aaPredicted RBP18.77■□□□□ 0.6
CLK3-202ENST00000395066 PPM1BO75688 479 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 GLCEO94923 617 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 P2RX1P51575 399 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 FBXO46Q6PJ61 603 aaPredicted RBP18.77■□□□□ 0.6
CLK3-202ENST00000395066 ZNF321PQ8N8H1 164 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 OR6M1Q8NGM8 313 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 TAS2R5Q9NYW4 299 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 FBXL3Q9UKT7 428 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 PCDHGA5Q9Y5G8 931 aa18.77■□□□□ 0.6
CLK3-202ENST00000395066 TNFRSF10CO14798 259 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 POU3F2P20265 443 aaPredicted RBP18.76■□□□□ 0.59
CLK3-202ENST00000395066 CTXN1P60606 82 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 HHEXQ03014 270 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 HYAL4Q2M3T9 481 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 OR5M10Q6IEU7 315 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 POMZP3Q6PJE2 187 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 ARHGEF39Q8N4T4 335 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 ESX1Q8N693 406 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 OR52B4Q8NGK2 314 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 ADAD1Q96M93 576 aaKnown RBP18.76■□□□□ 0.59
CLK3-202ENST00000395066 DGAT2Q96PD7 388 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 B3GNT4Q9C0J1 378 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 OR10A5Q9H207 317 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 KCNK15Q9H427 330 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 MED9Q9NWA0 146 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 TMEM184BQ9Y519 407 aaPredicted RBP18.76■□□□□ 0.59
CLK3-202ENST00000395066 TRAV8-7A0A075B6U6 113 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 TCRBV21S2A2A0A5A6 115 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 ANKRD20A5PA0PJZ0 165 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 OR2M5A3KFT3 312 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 ELOA3DA6NLF2 546 aaPredicted RBP18.76■□□□□ 0.59
CLK3-202ENST00000395066 ATP6V1G2-DDX39BF2Z307 99 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 CD1AP06126 327 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 NMBP08949 121 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 GPR3P46089 330 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 RPS4XP62701 263 aaKnown RBP18.76■□□□□ 0.59
CLK3-202ENST00000395066 DLX2Q07687 328 aaPredicted RBP18.76■□□□□ 0.59
CLK3-202ENST00000395066 ELOA3BQ3SY89 546 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 ZNF684Q5T5D7 378 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 OLFML2AQ68BL7 652 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 ZNF626Q68DY1 528 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 JAZF1Q86VZ6 243 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 OOSP2Q86WS3 158 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 MCATQ8IVS2 390 aaKnown RBP18.76■□□□□ 0.59
CLK3-202ENST00000395066 ELOA3Q8NG57 546 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 THEM6Q8WUY1 208 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 ST8SIA4Q92187 359 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 TOE1Q96GM8 510 aaKnown RBP18.76■□□□□ 0.59
CLK3-202ENST00000395066 TMPRSS13Q9BYE2 586 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 GPN1Q9HCN4 374 aaPredicted RBP18.76■□□□□ 0.59
CLK3-202ENST00000395066 PRTFDC1Q9NRG1 225 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 IKZF2Q9UKS7 526 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 LRP4O75096 1905 aa18.76■□□□□ 0.59
CLK3-202ENST00000395066 OR6C65A6NJZ3 312 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 PDCD5O14737 125 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 GPRIN2O60269 458 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 OR2A4O95047 310 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 LTBQ06643 244 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 SFRP5Q5T4F7 317 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.75■□□□□ 0.59
CLK3-202ENST00000395066 TMPRSS12Q86WS5 348 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 SLC35F3Q8IY50 421 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 OR2A7Q96R45 310 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 SHARPINQ9H0F6 387 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 TCF7L1Q9HCS4 588 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 ARPC3O15145 178 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 RAD1O60671 282 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 UPK3AO75631 287 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 SNAPC5O75971 98 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 TNFP01375 233 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 AKT2P31751 481 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 PPM1FP49593 454 aaPredicted RBP18.75■□□□□ 0.59
CLK3-202ENST00000395066 NHLRC1Q6VVB1 395 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 LRRC69Q6ZNQ3 347 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 COQ8AQ8NI60 647 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 PHOSPHO1Q8TCT1 267 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 GPBAR1Q8TDU6 330 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 ASB12Q8WXK4 309 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 PHYHIPQ92561 330 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 WDR76Q9H967 626 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 DZANK1Q9NVP4 752 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 TAS2R10Q9NYW0 307 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 BRWD1Q9NSI6 2320 aa18.75■□□□□ 0.59
CLK3-202ENST00000395066 SULT1B1O43704 296 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms