RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ACKR4Q9NPB9 350 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 LRIT1Q9P2V4 623 aa12.11□□□□□ -0.47
NFKB1-202ENST00000394820 MRPS2Q9Y399 296 aaKnown RBP12.11□□□□□ -0.47
NFKB1-202ENST00000394820 METTL12A8MUP2 240 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 H0YGG7 62 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 PRH1P02810 166 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ZNF823P16415 610 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 IL32P24001 234 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 PXNP49023 591 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-202ENST00000394820 EMDP50402 254 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ARF3P61204 181 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ACTA2P62736 377 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ACTG2P63267 376 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 TOMM20Q15388 145 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 SLC9A3R2Q15599 337 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ZNF658BQ4V348 819 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ALG10Q5BKT4 473 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 EOGTQ5NDL2 527 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 SEZ6L2Q6UXD5 910 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 LRRTM1Q86UE6 522 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 CMIPQ8IY22 773 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 GTPBP8Q8N3Z3 284 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-202ENST00000394820 RLN3Q8WXF3 142 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 TEX101Q9BY14 249 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 CACNA1GO43497 2377 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 CXorf51AA0A1B0GTR3 108 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 LOC105371267A0A1B0GV96 52 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 EPOPA6NHQ4 379 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 TO15178 435 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ZFPL1O95159 310 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 KNG1P01042 644 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 POU3F4P49335 361 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 DLX2Q07687 328 aaPredicted RBP12.1□□□□□ -0.47
NFKB1-202ENST00000394820 TMEM255AQ5JRV8 349 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 KRBOX4Q5JUW0 171 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 OR2L8Q8NGY9 312 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ZNF416Q9BWM5 594 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 CHST6Q9GZX3 395 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 PRDM7Q9NQW5 492 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ABRACLQ9P1F3 81 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 CELSR3Q9NYQ7 3312 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 SNRNP200O75643 2136 aaKnown RBP12.1□□□□□ -0.47
NFKB1-202ENST00000394820 CACNA1EQ15878 2313 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 A0A0A6YYD5 115 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 CCDC163A0A0D9SF12 145 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 CLDN4O14493 209 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 TAS2R20P59543 309 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 RAP2BP61225 183 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 RUNX2Q13950 521 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 DUSP6Q16828 381 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 CARD17Q5XLA6 110 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 TPRA1Q86W33 373 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ZNF584Q8IVC4 421 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 LINC00346Q8IVM7 164 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 GLB1L2Q8IW92 636 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 STPG2Q8N412 459 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ZNF248Q8NDW4 579 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 OR4D10Q8NGI6 311 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 OR5D18Q8NGL1 313 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ELOVL3Q9HB03 270 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 CMC2Q9NRP2 79 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 ZNF281Q9Y2X9 895 aa12.1□□□□□ -0.47
NFKB1-202ENST00000394820 SLC16A7O60669 478 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 DPM1O60762 260 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 EPPINO95925 133 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 IGFBP4P22692 258 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 SLC2A5P22732 501 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 MEP1BQ16820 701 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 GPAT4Q86UL3 456 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 C12orf45Q8N5I9 185 aaPredicted RBP12.09□□□□□ -0.47
NFKB1-202ENST00000394820 SP7Q8TDD2 431 aaPredicted RBP12.09□□□□□ -0.47
NFKB1-202ENST00000394820 SLC25A44Q96H78 314 aaPredicted RBP12.09□□□□□ -0.47
NFKB1-202ENST00000394820 C20orf24Q9BUV8 137 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 TCEAL2Q9H3H9 227 aaPredicted RBP12.09□□□□□ -0.47
NFKB1-202ENST00000394820 GHITMQ9H3K2 345 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 POMT2Q9UKY4 750 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 MRPS33Q9Y291 106 aaKnown RBP12.09□□□□□ -0.47
NFKB1-202ENST00000394820 TEX51A0A1B0GUA7 166 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 TMEM235A6NFC5 223 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 IFITM5A6NNB3 132 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 GPR89AB7ZAQ6 455 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 TXNL1O43396 289 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 AGR2O95994 175 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 ZGLP1P0C6A0 271 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 GPR89BP0CG08 455 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 HTR2AP28223 471 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 PEBP1P30086 187 aaKnown RBP12.09□□□□□ -0.47
NFKB1-202ENST00000394820 EPHA4P54764 986 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 RNASE10Q5GAN6 216 aaKnown RBP12.09□□□□□ -0.47
NFKB1-202ENST00000394820 BPIFB2Q8N4F0 458 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 CDRT4Q8N9R6 151 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 OR10H5Q8NGA6 315 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 ANGPTL6Q8NI99 470 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 PHOSPHO2Q8TCD6 241 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 ZPLD1Q8TCW7 415 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 DCUN1D4Q92564 292 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 ZNF75AQ96N20 296 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 PRR13Q9NZ81 148 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 DHDHQ9UQ10 334 aa12.09□□□□□ -0.47
NFKB1-202ENST00000394820 DSPPQ9NZW4 1301 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms