RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CDK5R1Q15078 307 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 YOD1Q5VVQ6 348 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 RSBN1Q5VWQ0 802 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 XKRXQ6PP77 449 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 FAM122BQ7Z309 247 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 GRINAQ7Z429 371 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 GALNT6Q8NCL4 622 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 AGBL5Q8NDL9 886 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 ENKURQ8TC29 256 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 MED18Q9BUE0 208 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 CCDC32Q9BV29 185 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 BEX2Q9BXY8 128 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 C11orf54Q9H0W9 315 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 HAO2Q9NYQ3 351 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 SEMA5BQ9P283 1151 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 KCNG2Q9UJ96 466 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 POLHQ9Y253 713 aa10.07□□□□□ -0.8
TCOF1-203ENST00000394269 RBMX2Q9Y388 322 aaKnown RBP10.07□□□□□ -0.8
TCOF1-203ENST00000394269 ZNF593O00488 134 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-203ENST00000394269 EIF1AYO14602 144 aaKnown RBP10.06□□□□□ -0.8
TCOF1-203ENST00000394269 ZFAND5O76080 213 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 ZFPL1O95159 310 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 PTTG1O95997 202 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 KRT8P05787 483 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 GUSBP08236 651 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 RPS18P62269 152 aaKnown RBP10.06□□□□□ -0.8
TCOF1-203ENST00000394269 ACSM1Q08AH1 577 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 C17orf67Q0P5P2 114 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 LINC01590Q5TEZ4 76 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 DMKNQ6E0U4 476 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-203ENST00000394269 MS4A15Q8N5U1 240 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 ZNF676Q8N7Q3 588 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 TRMT10AQ8TBZ6 339 aaKnown RBP10.06□□□□□ -0.8
TCOF1-203ENST00000394269 PPP1R14AQ96A00 147 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 COQ7Q99807 217 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 GAL3ST1Q99999 423 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 SEMA4CQ9C0C4 833 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 MYOTQ9UBF9 498 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 NOX1Q9Y5S8 564 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 A0A1W2PNR3 127 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 TOX3O15405 576 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-203ENST00000394269 POU3F1Q03052 451 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-203ENST00000394269 C19orf57Q0VDD7 668 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 FOXF1Q12946 379 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 HSD17B12Q53GQ0 312 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 AGAP7PQ5VUJ5 663 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 WDR5BQ86VZ2 330 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 MINDY2Q8NBR6 621 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 OR5L2Q8NGL0 311 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 OR5H6Q8NGV6 325 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 SMIM19Q96E16 107 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 SP140LQ9H930 580 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 FKRPQ9H9S5 495 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 CPNE5Q9HCH3 593 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 UGT2A1Q9Y4X1 527 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 HRH3Q9Y5N1 445 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 EML5Q05BV3 1969 aa10.06□□□□□ -0.8
TCOF1-203ENST00000394269 D6RAR5 112 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 FLRT2O43155 660 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 MAS1P04201 325 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 EIF4EP06730 217 aaKnown RBP10.05□□□□□ -0.8
TCOF1-203ENST00000394269 FCER2P06734 321 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 FBXO45P0C2W1 286 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 RGS19P49795 217 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 ZNF41P51814 821 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-203ENST00000394269 SLC26A5P58743 744 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 FMODQ06828 376 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 CARD17Q5XLA6 110 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 MDGA2Q7Z553 956 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 DNAAF1Q8NEP3 725 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 NFAM1Q8NET5 270 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-203ENST00000394269 TMEM234Q8WY98 164 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 DERL3Q96Q80 235 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 AMELYQ99218 206 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 WDR77Q9BQA1 342 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-203ENST00000394269 TTYH2Q9BSA4 534 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 SLC39A1Q9NY26 324 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 ST6GALNAC2Q9UJ37 374 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 C19orf67A6NJJ6 358 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 OR6C76A6NM76 312 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 B4DXG7 233 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 TO15178 435 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 IDH3BO43837 385 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 CER1O95813 267 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 BGLAPP02818 100 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 IFNGR1P15260 489 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 UQCRC1P31930 480 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 MTNR1BP49286 362 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 EVX1P49640 407 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 ADAM8P78325 824 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 BDH1Q02338 343 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 TLE3Q04726 772 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 SIGLEC14Q08ET2 396 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 OR4M1Q8NGD0 313 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 TXNDC15Q96J42 360 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 DMRTB1Q96MA1 342 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 INTS14Q96SY0 518 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 NDEL1Q9GZM8 345 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 TGIF2Q9GZN2 237 aa10.05□□□□□ -0.8
TCOF1-203ENST00000394269 SIAEQ9HAT2 523 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms