RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 A0A087WUJ7 227 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 DEAF1O75398 565 aaPredicted RBP13.14□□□□□ -0.31
CHMP3-202ENST00000393773 BGLAPP02818 100 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 IL6P05231 212 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 EPHA3P29320 983 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 MAGEB1P43366 347 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 LIMS1P48059 325 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 AQP5P55064 265 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 VSNL1P62760 191 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 MYBPC1Q00872 1141 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 GALK2Q01415 458 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 BST1Q10588 318 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 PDCD4Q53EL6 469 aaKnown RBP13.14□□□□□ -0.31
CHMP3-202ENST00000393773 AWAT1Q58HT5 328 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 GKAP1Q5VSY0 366 aaPredicted RBP13.14□□□□□ -0.31
CHMP3-202ENST00000393773 FAHD2BQ6P2I3 314 aaPredicted RBP13.14□□□□□ -0.31
CHMP3-202ENST00000393773 AENQ8WTP8 325 aaKnown RBP13.14□□□□□ -0.31
CHMP3-202ENST00000393773 FAHD2AQ96GK7 314 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 TXNDC15Q96J42 360 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 FOXB1Q99853 325 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 SLC6A7Q99884 636 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 TMEM109Q9BVC6 243 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 ULBP2Q9BZM5 246 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 WDR55Q9H6Y2 383 aaPredicted RBP13.14□□□□□ -0.31
CHMP3-202ENST00000393773 ZNF665Q9H7R5 613 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 CACYBPQ9HB71 228 aaKnown RBP13.14□□□□□ -0.31
CHMP3-202ENST00000393773 BCL2L10Q9HD36 194 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 SSU72Q9NP77 194 aaKnown RBP13.14□□□□□ -0.31
CHMP3-202ENST00000393773 A4GALTQ9NPC4 353 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 THUMPD1Q9NXG2 353 aaKnown RBP13.14□□□□□ -0.31
CHMP3-202ENST00000393773 RPS6KB2Q9UBS0 482 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 ZNF232Q9UNY5 417 aa13.14□□□□□ -0.31
CHMP3-202ENST00000393773 A0A1W2PPW3 197 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 TM9SF1O15321 606 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 UBL3O95164 117 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 RAB36O95755 333 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 BMP2P12643 396 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 HOXB9P17482 250 aaPredicted RBP13.13□□□□□ -0.31
CHMP3-202ENST00000393773 RAB1AP62820 205 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 MPP2Q14168 576 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 RAB39AQ14964 217 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 ALKBH6Q3KRA9 238 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 ALG10BQ5I7T1 473 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 PRR31Q5SQ13 230 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 NET1Q7Z628 596 aaPredicted RBP13.13□□□□□ -0.31
CHMP3-202ENST00000393773 TEX29Q8N6K0 151 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 SCAIQ8N9R8 606 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 OR6S1Q8NH40 331 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 BBS10Q8TAM1 723 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 MAL2Q969L2 176 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 MOGAT1Q96PD6 335 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 JMJD8Q96S16 334 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 SUCNR1Q9BXA5 334 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 B3GAT2Q9NPZ5 323 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 FBXL3Q9UKT7 428 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 ZNF346Q9UL40 294 aaKnown RBP13.13□□□□□ -0.31
CHMP3-202ENST00000393773 POFUT2Q9Y2G5 429 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 CORINQ9Y5Q5 1042 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 VWFP04275 2813 aa13.13□□□□□ -0.31
CHMP3-202ENST00000393773 IGLV3-9A0A075B6K5 115 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 SLC22A3O75751 556 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 ANP32DO95626 131 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 FSHBP01225 129 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 IDO1P14902 403 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 NQO1P15559 274 aaKnown RBP13.12□□□□□ -0.31
CHMP3-202ENST00000393773 PRKAR1BP31321 381 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 PUDPQ08623 228 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 STX3Q13277 289 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 CAMK2DQ13557 499 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 AVPI1Q5T686 147 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 MSANTD1Q6ZTZ1 278 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 PAQR4Q8N4S7 273 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-202ENST00000393773 ZDHHC22Q8N966 263 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 FGFBP3Q8TAT2 258 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 MGARPQ8TDB4 240 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 DNAJA4Q8WW22 397 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-202ENST00000393773 TSPAN32Q96QS1 320 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 DUSP13Q9UII6 198 aa13.12□□□□□ -0.31
CHMP3-202ENST00000393773 A0A0G2JMP0 313 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 A0A0X1KG70 313 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 TMEM247A6NEH6 219 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 C17orf100A8MU93 164 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 PLPP2O43688 288 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 MPZL1O95297 269 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 CLPTM1O96005 669 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 IGHV2-5P01817 119 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 PATE4P0C8F1 98 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 ADRA2CP18825 462 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 CCL8P80075 99 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 RGNQ15493 299 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 NKPD1Q17RQ9 610 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 KRT71Q3SY84 523 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 GLIPR1L2Q4G1C9 344 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 FAM91A1Q658Y4 838 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 RGS7BPQ6MZT1 257 aaPredicted RBP13.11□□□□□ -0.31
CHMP3-202ENST00000393773 ACSM5Q6NUN0 579 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 OR4M2Q8NGB6 313 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 OR9I1Q8NGQ6 314 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 OR6N1Q8NGY5 312 aa13.11□□□□□ -0.31
CHMP3-202ENST00000393773 ITCHQ96J02 903 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms