RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CREBL2O60519 120 aaPredicted RBP17.13■□□□□ 0.33
CBX1-202ENST00000393408 TPPPO94811 219 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 CLPSP04118 112 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 ASAH2BP0C7U1 165 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 SPTBP11277 2137 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 LTBQ06643 244 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 WDR45BQ5MNZ6 344 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 TMEM92Q6UXU6 159 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 TAF8Q7Z7C8 310 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 TMPRSS12Q86WS5 348 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 C7orf61Q8IZ16 206 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 MEIOBQ8N635 442 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 FRMD1Q8N878 549 aa17.13■□□□□ 0.33
CBX1-202ENST00000393408 TRAV8-7A0A075B6U6 113 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 TRBV5-7A0A0A0MS05 114 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 OR2M5A3KFT3 312 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 OR4C45A6NMZ5 311 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 SNRPGP15A8MWD9 76 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 CLDN4O14493 209 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 PRKNO60260 465 aaPredicted RBP17.12■□□□□ 0.33
CBX1-202ENST00000393408 F13BP05160 661 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 CXCL2P19875 107 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 CSRP1P21291 193 aaKnown RBP17.12■□□□□ 0.33
CBX1-202ENST00000393408 HOXD11P31277 338 aaPredicted RBP17.12■□□□□ 0.33
CBX1-202ENST00000393408 HHEXQ03014 270 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 EGR4Q05215 589 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 PLA2G7Q13093 441 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 ZNF578Q96N58 590 aaPredicted RBP17.12■□□□□ 0.33
CBX1-202ENST00000393408 GPN1Q9HCN4 374 aaPredicted RBP17.12■□□□□ 0.33
CBX1-202ENST00000393408 TVP23AA6NH52 213 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 SCO1O75880 301 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 OR2A4O95047 310 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 HRGP04196 525 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 ITPKBP27987 946 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 ADH7P40394 386 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 RABIFP47224 123 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 PSMA6P60900 246 aaKnown RBP17.12■□□□□ 0.33
CBX1-202ENST00000393408 RAP2BP61225 183 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 EIF2B5Q13144 721 aaKnown RBP17.12■□□□□ 0.33
CBX1-202ENST00000393408 SKP2Q13309 424 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 CCDC120Q96HB5 630 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 OR2A7Q96R45 310 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 LPAR4Q99677 370 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 TMEM106CQ9BVX2 250 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 PBX4Q9BYU1 374 aa17.12■□□□□ 0.33
CBX1-202ENST00000393408 A0A1W2PPL8 197 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 H7C1C5 153 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 ZNF254O75437 659 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 MST1P26927 711 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 CCR4P51679 360 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 LCN6P62502 163 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 SKP1P63208 163 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 HTR4Q13639 388 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 MESTQ5EB52 335 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 CBLN3Q6UW01 205 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 TMEM184AQ6ZMB5 413 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 MED25Q71SY5 747 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 KANSL1Q7Z3B3 1105 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 HDDC2Q7Z4H3 204 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 OR2G2Q8NGZ5 317 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 LAMP5Q9UJQ1 280 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 IKZF2Q9UKS7 526 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 TUBAL3A6NHL2 446 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 ANXA2P2A6NMY6 339 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 XRCC3O43542 346 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 MAS1P04201 325 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 ANXA2P07355 339 aaKnown RBP17.11■□□□□ 0.33
CBX1-202ENST00000393408 UBL4AP11441 157 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 C4BPBP20851 252 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 SCAND1P57086 179 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 RPL18Q07020 188 aaKnown RBP17.11■□□□□ 0.33
CBX1-202ENST00000393408 GLB1L2Q8IW92 636 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 OR10AC1Q8NH08 325 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 ZNF524Q96C55 264 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 ELMOD3Q96FG2 381 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 TSPAN32Q96QS1 320 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 UBQLN4Q9NRR5 601 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 GRHPRQ9UBQ7 328 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 TMEM131Q92545 1883 aa17.11■□□□□ 0.33
CBX1-202ENST00000393408 ZNF432O94892 652 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 AKR7A3O95154 331 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 DMWDQ09019 674 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 GRM7Q14831 915 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 CSRP2Q16527 193 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 EMC4Q5J8M3 183 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 ZNF417Q8TAU3 575 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 PHOSPHO1Q8TCT1 267 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 ADAMTS18Q8TE60 1221 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 WDR89Q96FK6 387 aaPredicted RBP17.1■□□□□ 0.33
CBX1-202ENST00000393408 SFXN2Q96NB2 322 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 TMPRSS13Q9BYE2 586 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 WDR76Q9H967 626 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 PRODH2Q9UF12 536 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 SPEF1Q9Y4P9 236 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 SRPX2O60687 465 aaPredicted RBP17.1■□□□□ 0.33
CBX1-202ENST00000393408 NSA2O95478 260 aaKnown RBP17.1■□□□□ 0.33
CBX1-202ENST00000393408 ALOX5APP20292 161 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 PBX2P40425 430 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 MFSD13AQ14CX5 517 aa17.1■□□□□ 0.33
CBX1-202ENST00000393408 NHLRC3Q5JS37 347 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms