RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ZNF726A6NNF4 738 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 EVPLLA8MZ36 301 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 HLA-DOBP13765 273 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 PUDPQ08623 228 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 CR1LQ2VPA4 569 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 PHYHD1Q5SRE7 291 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 ZNF813Q6ZN06 617 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 RANBP3LQ86VV4 465 aaPredicted RBP22.82■■□□□ 1.24
NPHP3-202ENST00000383282 FUNDC1Q8IVP5 155 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 CDK20Q8IZL9 346 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 C10orf53Q8N6V4 93 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 OR6N1Q8NGY5 312 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 UBASH3BQ8TF42 649 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 HPS1Q92902 700 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 C19orf24Q9BVV8 132 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 RSPO3Q9BXY4 272 aaPredicted RBP22.82■■□□□ 1.24
NPHP3-202ENST00000383282 ULBP2Q9BZM5 246 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 TMEM38AQ9H6F2 299 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 MED29Q9NX70 200 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 GMEB1Q9Y692 573 aa22.82■■□□□ 1.24
NPHP3-202ENST00000383282 HPRP00739 348 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 HLA-HP01893 362 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 BGLAPP02818 100 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 ADRA2AP08913 450 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 TACSTD2P09758 323 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 NR4A1P22736 598 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 AHCYP23526 432 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 APEX1P27695 318 aaKnown RBP22.81■■□□□ 1.24
NPHP3-202ENST00000383282 GYS2P54840 703 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 PAGE3Q5JUK9 113 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 LIPNQ5VXI9 398 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 UGT2A3Q6UWM9 527 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 ARMC8Q8IUR7 673 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 B3GNT2Q9NY97 397 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 MRPL39Q9NYK5 338 aaKnown RBP22.81■■□□□ 1.24
NPHP3-202ENST00000383282 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.81■■□□□ 1.24
NPHP3-202ENST00000383282 ANGPT4Q9Y264 503 aa22.81■■□□□ 1.24
NPHP3-202ENST00000383282 IFNGR1P15260 489 aa22.8■■□□□ 1.24
NPHP3-202ENST00000383282 TRMT5Q32P41 509 aaKnown RBP22.8■■□□□ 1.24
NPHP3-202ENST00000383282 SWT1Q5T5J6 900 aaKnown RBP22.8■■□□□ 1.24
NPHP3-202ENST00000383282 C10orf111Q8N326 155 aa22.8■■□□□ 1.24
NPHP3-202ENST00000383282 HIPK4Q8NE63 616 aa22.8■■□□□ 1.24
NPHP3-202ENST00000383282 FOXB1Q99853 325 aa22.8■■□□□ 1.24
NPHP3-202ENST00000383282 SOX7Q9BT81 388 aa22.8■■□□□ 1.24
NPHP3-202ENST00000383282 TMEM43Q9BTV4 400 aa22.8■■□□□ 1.24
NPHP3-202ENST00000383282 LILRA1O75019 489 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 RAB36O95755 333 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 GPX2P18283 190 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 AQP1P29972 269 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 EVX1P49640 407 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 GNGT1P63211 74 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 PIGFQ07326 219 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 CAMK2DQ13557 499 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 ZNF627Q7L945 461 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 PXKQ7Z7A4 578 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 LINC01356Q8N9X3 169 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 STON2Q8WXE9 905 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 MRPL24Q96A35 216 aaKnown RBP22.79■■□□□ 1.24
NPHP3-202ENST00000383282 MS4A3Q96HJ5 214 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 TXNDC15Q96J42 360 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 SNX18Q96RF0 628 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 NSRP1Q9H0G5 558 aaKnown RBP22.79■■□□□ 1.24
NPHP3-202ENST00000383282 TPK1Q9H3S4 243 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 DENND2DQ9H6A0 471 aaPredicted RBP22.79■■□□□ 1.24
NPHP3-202ENST00000383282 TRIM33Q9UPN9 1127 aa22.79■■□□□ 1.24
NPHP3-202ENST00000383282 M0R233 179 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 SYNGR3O43761 229 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 SERPINI2O75830 405 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 MT-ATP6P00846 226 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 C8BP07358 591 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 B4GALT1P15291 398 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 PTDSS1P48651 473 aaKnown RBP22.78■■□□□ 1.24
NPHP3-202ENST00000383282 CDH12P55289 794 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 RPS23P62266 143 aaKnown RBP22.78■■□□□ 1.24
NPHP3-202ENST00000383282 GALK2Q01415 458 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 SF3A3Q12874 501 aaKnown RBP eCLIP22.78■■□□□ 1.24
NPHP3-202ENST00000383282 AGKQ53H12 422 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 GKAP1Q5VSY0 366 aaPredicted RBP22.78■■□□□ 1.24
NPHP3-202ENST00000383282 MOGAT1Q96PD6 335 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 TMEM120AQ9BXJ8 343 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 MS4A5Q9H3V2 200 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 FBXL3Q9UKT7 428 aa22.78■■□□□ 1.24
NPHP3-202ENST00000383282 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.77■■□□□ 1.241e-8■■□□□ 13.1
NPHP3-202ENST00000383282 TRBV5-3A0A0A0MS03 114 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 PLPP3O14495 311 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 OR6A2O95222 327 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 ZNF14P17017 642 aaPredicted RBP22.77■■□□□ 1.24
NPHP3-202ENST00000383282 LSP1P33241 339 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 CSNK1A1P48729 337 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 ARFIP2P53365 341 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 SRSF2Q01130 221 aaKnown RBP22.77■■□□□ 1.24
NPHP3-202ENST00000383282 RIN1Q13671 783 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 OR5J2Q8NH18 312 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 MRPL37Q9BZE1 423 aaKnown RBP22.77■■□□□ 1.24
NPHP3-202ENST00000383282 IKZF5Q9H5V7 419 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 SLC52A3Q9NQ40 469 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 REV1Q9UBZ9 1251 aa22.77■■□□□ 1.24
NPHP3-202ENST00000383282 TMEFF2Q9UIK5 374 aaPredicted RBP22.77■■□□□ 1.24
NPHP3-202ENST00000383282 TPST2O60704 377 aa22.76■■□□□ 1.23
NPHP3-202ENST00000383282 UBL3O95164 117 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms