RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 C11orf65Q8NCR3 313 aa14.91□□□□□ -0.02
HMGN1-204ENST00000380749 CKAP2Q8WWK9 683 aa14.91□□□□□ -0.02
HMGN1-204ENST00000380749 MOGAT1Q96PD6 335 aa14.91□□□□□ -0.02
HMGN1-204ENST00000380749 SLC52A3Q9NQ40 469 aa14.91□□□□□ -0.02
HMGN1-204ENST00000380749 LEF1Q9UJU2 399 aaPredicted RBP14.91□□□□□ -0.02
HMGN1-204ENST00000380749 CMAHPQ9Y471 501 aa14.91□□□□□ -0.02
HMGN1-204ENST00000380749 SPEF1Q9Y4P9 236 aa14.91□□□□□ -0.02
HMGN1-204ENST00000380749 SERPINI2O75830 405 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 STAMBPO95630 424 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 RAB36O95755 333 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 HLA-HP01893 362 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 VIMP08670 466 aaKnown RBP14.9□□□□□ -0.02
HMGN1-204ENST00000380749 B4GALT1P15291 398 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 AHCYP23526 432 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 GIFP27352 417 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 THBS2P35442 1172 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 RBBP4Q09028 425 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 ADRM1Q16186 407 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 FAM120AOSQ5T036 256 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 ZNF613Q6PF04 617 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 ZNF627Q7L945 461 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 PXKQ7Z7A4 578 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 CDK20Q8IZL9 346 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 SMYD1Q8NB12 490 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 OR5J2Q8NH18 312 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 ATP6V1G3Q96LB4 118 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 DOK1Q99704 481 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 DENND2DQ9H6A0 471 aaPredicted RBP14.9□□□□□ -0.02
HMGN1-204ENST00000380749 FBXL3Q9UKT7 428 aa14.9□□□□□ -0.02
HMGN1-204ENST00000380749 SH3PXD2BA1X283 911 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 M0R3H8 397 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 ANGPT2O15123 496 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 CHP2O43745 196 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 MFN2O95140 757 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 OR6A2O95222 327 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 TGFAP01135 160 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 ADORA3P0DMS8 318 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 LSP1P33241 339 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 CSNK1A1P48729 337 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 CHN2P52757 468 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 PCBP3P57721 371 aaKnown RBP14.89□□□□□ -0.03
HMGN1-204ENST00000380749 RPS23P62266 143 aaKnown RBP14.89□□□□□ -0.03
HMGN1-204ENST00000380749 CAMK2DQ13557 499 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 TRMT5Q32P41 509 aaKnown RBP14.89□□□□□ -0.03
HMGN1-204ENST00000380749 DLEU7Q6UYE1 221 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 IL17RELQ6ZVW7 336 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 MCHR1Q99705 422 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 FOXB1Q99853 325 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 B3GNT2Q9NY97 397 aa14.89□□□□□ -0.03
HMGN1-204ENST00000380749 LRRN3E7EW58 273 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 M0R233 179 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 PLPP3O14495 311 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 TPST2O60704 377 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 ENTPD5O75356 428 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 UBL3O95164 117 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 NR4A1P22736 598 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 PTDSS1P48651 473 aaKnown RBP14.88□□□□□ -0.03
HMGN1-204ENST00000380749 GALK2Q01415 458 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 RUNDC3AQ59EK9 446 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 PTOV1Q86YD1 416 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 SLC30A8Q8IWU4 369 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 ZNF786Q8N393 782 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 STON2Q8WXE9 905 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 MRPL24Q96A35 216 aaKnown RBP14.88□□□□□ -0.03
HMGN1-204ENST00000380749 MS4A3Q96HJ5 214 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 TXNDC15Q96J42 360 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 ARHGDIGQ99819 225 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 WFDC6Q9BQY6 131 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 NDUFAF1Q9Y375 327 aa14.88□□□□□ -0.03
HMGN1-204ENST00000380749 TMEM129A0AVI4 362 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 CPSF4LA6NMK7 179 aaKnown RBP14.87□□□□□ -0.03
HMGN1-204ENST00000380749 C11orf98E9PRG8 122 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 SYNGR3O43761 229 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 OPN1SWP03999 348 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 ADRA2AP08913 450 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 TACSTD2P09758 323 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 IFNGR1P15260 489 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 ZNF14P17017 642 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-204ENST00000380749 APEX1P27695 318 aaKnown RBP14.87□□□□□ -0.03
HMGN1-204ENST00000380749 EVX1P49640 407 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 MTPNP58546 118 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 PIGFQ07326 219 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 GKAP1Q5VSY0 366 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-204ENST00000380749 ZCCHC24Q8N2G6 241 aaKnown RBP14.87□□□□□ -0.03
HMGN1-204ENST00000380749 DPP10Q8N608 796 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 UBASH3BQ8TF42 649 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 HPS1Q92902 700 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 TPK1Q9H3S4 243 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 TRIM33Q9UPN9 1127 aa14.87□□□□□ -0.03
HMGN1-204ENST00000380749 LRP5LA4QPB2 252 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 GLRXP35754 106 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 GIPRP48546 466 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 BIDP55957 195 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 RAB1AP62820 205 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 DUSP7Q16829 419 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 TTMPQ5BVD1 217 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 ENTPD8Q5MY95 495 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 INTS11Q5TA45 600 aaKnown RBP14.86□□□□□ -0.03
HMGN1-204ENST00000380749 UGT2A3Q6UWM9 527 aa14.86□□□□□ -0.03
HMGN1-204ENST00000380749 PATL1Q86TB9 770 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms