RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 MBD3L5A6NJ08 208 aaPredicted RBP13.39□□□□□ -0.27
RPP40-202ENST00000380051 RIIAD1A6NNX1 92 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 CENPBD1B2RD01 187 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 XKRYO14609 159 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 AHCYL1O43865 530 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 CLIC3O95833 236 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 HIST1H1CP16403 213 aaKnown RBP13.39□□□□□ -0.27
RPP40-202ENST00000380051 MYF6P23409 242 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 BIDP55957 195 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 CLDN17P56750 224 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 ZNF362Q5T0B9 420 aaPredicted RBP13.39□□□□□ -0.27
RPP40-202ENST00000380051 RTL6Q6ICC9 239 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 PLXDC2Q6UX71 529 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 RPTNQ6XPR3 784 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 ADCK1Q86TW2 530 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 JAZF1Q86VZ6 243 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 CCDC71Q8IV32 467 aaPredicted RBP13.39□□□□□ -0.27
RPP40-202ENST00000380051 ZIC4Q8N9L1 334 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 OR52E2Q8NGJ4 325 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 OR4K13Q8NH42 304 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 MBD3L2Q8NHZ7 208 aaPredicted RBP13.39□□□□□ -0.27
RPP40-202ENST00000380051 TMEM45BQ96B21 275 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 GMPPAQ96IJ6 420 aaPredicted RBP13.39□□□□□ -0.27
RPP40-202ENST00000380051 SNX18Q96RF0 628 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 FN3KQ9H479 309 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 PARPBPQ9NWS1 579 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 RCE1Q9Y256 329 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 SHANK1Q9Y566 2161 aa13.39□□□□□ -0.27
RPP40-202ENST00000380051 SLC35F4A4IF30 521 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 ACADSP16219 412 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 ZNF3P17036 446 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 TIMP3P35625 211 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 CASP6P55212 293 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 ISL1P61371 349 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 SNRPGP62308 76 aaKnown RBP13.38□□□□□ -0.27
RPP40-202ENST00000380051 IL5RAQ01344 420 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPP40-202ENST00000380051 KRR1Q13601 381 aaKnown RBP13.38□□□□□ -0.27
RPP40-202ENST00000380051 MELKQ14680 651 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 MESTQ5EB52 335 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 TMEM201Q5SNT2 666 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 B3GNT6Q6ZMB0 384 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 PTCHD4Q6ZW05 846 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 THAP5Q7Z6K1 395 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 TUSC5Q8IXB3 177 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 TCEANCQ8N8B7 351 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 RHOXF1Q8NHV9 184 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 RASD2Q96D21 266 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 SLC25A44Q96H78 314 aaPredicted RBP13.38□□□□□ -0.27
RPP40-202ENST00000380051 ZNF385AQ96PM9 386 aaKnown RBP13.38□□□□□ -0.27
RPP40-202ENST00000380051 DDOQ99489 341 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 NOSIPQ9Y314 301 aaKnown RBP13.38□□□□□ -0.27
RPP40-202ENST00000380051 FAM215AQ9Y5M1 114 aa13.38□□□□□ -0.27
RPP40-202ENST00000380051 KDM4EB2RXH2 506 aaPredicted RBP13.37□□□□□ -0.27
RPP40-202ENST00000380051 M0R3G1 203 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 ARHGEF9O43307 516 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 TLX2O43763 284 aaPredicted RBP13.37□□□□□ -0.27
RPP40-202ENST00000380051 PRKYO43930 277 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 SS18L1O75177 396 aaPredicted RBP13.37□□□□□ -0.27
RPP40-202ENST00000380051 TRMUO75648 421 aaKnown RBP13.37□□□□□ -0.27
RPP40-202ENST00000380051 SLC2A10O95528 541 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 RENP00797 406 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 IGHG1P01857 330 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 GNAO1P09471 354 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 CDKN2AP42771 156 aaKnown RBP13.37□□□□□ -0.27
RPP40-202ENST00000380051 ITGADQ13349 1161 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 MED21Q13503 144 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 EIF2S3LQ2VIR3 472 aaKnown RBP13.37□□□□□ -0.27
RPP40-202ENST00000380051 SLC25A30Q5SVS4 291 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 AAED1Q7RTV5 226 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 ALPK2Q86TB3 2170 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 ENTHD1Q8IYW4 607 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 FAM26EQ8N5C1 309 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 C9orf106Q8NAJ2 232 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 SLC37A3Q8NCC5 494 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 NPEPL1Q8NDH3 523 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 TMEM163Q8TC26 289 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 FNDC8Q8TC99 324 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 UBE2FQ969M7 185 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 ZNF566Q969W8 418 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 INTS12Q96CB8 462 aaKnown RBP13.37□□□□□ -0.27
RPP40-202ENST00000380051 ZFP3Q96NJ6 502 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 ALG12Q9BV10 488 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 EMC6Q9BV81 110 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 MRPL13Q9BYD1 178 aaKnown RBP13.37□□□□□ -0.27
RPP40-202ENST00000380051 ZNF226Q9NYT6 803 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 RNF6Q9Y252 685 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 COL6A6A6NMZ7 2263 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 MED12LQ86YW9 2145 aa13.37□□□□□ -0.27
RPP40-202ENST00000380051 ARHGAP21Q5T5U3 1957 aa13.36□□□□□ -0.27
RPP40-202ENST00000380051 PRSS37A4D1T9 235 aa13.36□□□□□ -0.27
RPP40-202ENST00000380051 PRR23D1E9PI22 279 aaPredicted RBP13.36□□□□□ -0.27
RPP40-202ENST00000380051 MRPL33O75394 65 aaKnown RBP13.36□□□□□ -0.27
RPP40-202ENST00000380051 ZNF432O94892 652 aa13.36□□□□□ -0.27
RPP40-202ENST00000380051 CRHP06850 196 aa13.36□□□□□ -0.27
RPP40-202ENST00000380051 PRR23D2P0DMB1 279 aaPredicted RBP13.36□□□□□ -0.27
RPP40-202ENST00000380051 NR2C1P13056 603 aa13.36□□□□□ -0.27
RPP40-202ENST00000380051 GABRB1P18505 474 aa13.36□□□□□ -0.27
RPP40-202ENST00000380051 PAICSP22234 425 aaKnown RBP13.36□□□□□ -0.27
RPP40-202ENST00000380051 MAD2L1BPQ15013 274 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms