RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 CA10Q9NS85 328 aa21.46■■□□□ 1.03
TNFRSF4-201ENST00000379236 ZNF229Q9UJW7 825 aa21.46■■□□□ 1.03
TNFRSF4-201ENST00000379236 FKBP7Q9Y680 259 aa21.46■■□□□ 1.03
TNFRSF4-201ENST00000379236 HIVEP2P31629 2446 aa21.46■■□□□ 1.03
TNFRSF4-201ENST00000379236 FAM220BPB1ANY3 271 aa21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 INAFM1C9JVW0 142 aa21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 IGKV3-15P01624 115 aa21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 IGLV1-44P01699 117 aa21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 CD79AP11912 226 aa21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 IFNGR1P15260 489 aa21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 ZNF813Q6ZN06 617 aa21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 OR2T12Q8NG77 320 aa21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 POLR2J2Q9GZM3 115 aaKnown RBP21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 POLR2J3Q9H1A7 115 aaKnown RBP21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 ARFGEF3Q5TH69 2177 aa21.45■■□□□ 1.02
TNFRSF4-201ENST00000379236 ALPK2Q86TB3 2170 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 THY1P04216 161 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 TNFRSF1BP20333 461 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 SERPINF1P36955 418 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 DNM1P46Q6ZS02 220 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 SLC35D2Q76EJ3 337 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 SLC46A3Q7Z3Q1 461 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 ARPINQ7Z6K5 226 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 MDP1Q86V88 176 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 RCN3Q96D15 328 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 ZNF583Q96ND8 569 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 ARMCX1Q9P291 453 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 AP3M1Q9Y2T2 418 aa21.44■■□□□ 1.02
TNFRSF4-201ENST00000379236 LYPD3O95274 346 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 CELA3BP08861 270 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 CSF3P09919 207 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 IFNA8P32881 189 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 MDH1P40925 334 aaKnown RBP21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 EFNA4P52798 201 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 CRYBA2P53672 197 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 ZP4Q12836 540 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 GSG1Q2KHT4 349 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 ZNF525Q8N782 197 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 POU5F2Q8N7G0 328 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 IL17RDQ8NFM7 739 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 RP9Q8TA86 221 aaKnown RBP21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 FAM168AQ92567 244 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 TPD52L3Q96J77 140 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 FOXB1Q99853 325 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 SEC61A2Q9H9S3 476 aa21.43■■□□□ 1.02
TNFRSF4-201ENST00000379236 IGHV4-30-2A0A087WSY4 118 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 ELOVL7A1L3X0 281 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 B9A039 149 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 CCDC22O60826 627 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 SHOX2O60902 331 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 PDE5AO76074 875 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 OR5F1O95221 314 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 B4GALT1P15291 398 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 CALCRP30988 508 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 MELKQ14680 651 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 CYBRD1Q53TN4 286 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 CSPG4Q6UVK1 2322 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 TSPYL5Q86VY4 417 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 MICU2Q8IYU8 434 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 LRRC17Q8N6Y2 441 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 OR6X1Q8NH79 312 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 LZICQ8WZA0 190 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 ZNF566Q969W8 418 aa21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 VRK1Q99986 396 aaPredicted RBP21.42■■□□□ 1.02
TNFRSF4-201ENST00000379236 CHD3Q12873 2000 aaKnown RBP21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 BLOC1S5-TXNDC5H3BN57 136 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 ENTPD5O75356 428 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 RAB36O95755 333 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 HLA-HP01893 362 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 MT-ND1P03886 318 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 OR4A8P0C604 315 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 SLC25A16P16260 332 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 KDELR2P33947 212 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 RBM34P42696 430 aaKnown RBP21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 OR1E2P47887 323 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 SWI5Q1ZZU3 235 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 NUP37Q8NFH4 326 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 PRSS27Q9BQR3 290 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 ZNF426Q9BUY5 554 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 TAS2R5Q9NYW4 299 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 GLTPQ9NZD2 209 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 RIMS3Q9UJD0 308 aa21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 FBXO9Q9UK97 447 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 FN1P02751 2386 aaKnown RBP21.41■■□□□ 1.02
TNFRSF4-201ENST00000379236 A0A1W2PRG6 482 aa21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 ZNF503-AS2A6NEH8 195 aa21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 MCIDASD6RGH6 385 aa21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 UBL3O95164 117 aa21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 BCL10O95999 233 aa21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 PIGFQ07326 219 aa21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 PIN1Q13526 163 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 MYPOPQ86VE0 399 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 NKAIN4Q8IVV8 208 aa21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 TMEM255BQ8WV15 326 aa21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 TMEM239Q8WW34 195 aa21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 SGTBQ96EQ0 304 aa21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 SLC25A44Q96H78 314 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF4-201ENST00000379236 IGHV2OR16-5A0A0B4J2B6 119 aa21.39■■□□□ 1.01
TNFRSF4-201ENST00000379236 GSTA4O15217 222 aa21.39■■□□□ 1.01
TNFRSF4-201ENST00000379236 F12P00748 615 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms