RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MRPL39Q9NYK5 338 aaKnown RBP18.23■□□□□ 0.51
VSX1-201ENST00000376707 SLC35F4A4IF30 521 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 ZNF726A6NNF4 738 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 M0QX08 132 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 FBP2O00757 339 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 LMX1BO60663 402 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 SERPINI2O75830 405 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 APEHP13798 732 aaKnown RBP18.22■□□□□ 0.51
VSX1-201ENST00000376707 AHCYP23526 432 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 PCGF2P35227 344 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 GZMMP51124 257 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 ZNF613Q6PF04 617 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 LINC00114Q6XXX2 140 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 PATL1Q86TB9 770 aaKnown RBP18.22■□□□□ 0.51
VSX1-201ENST00000376707 SVOPLQ8N434 492 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 ZNF540Q8NDQ6 660 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 GPR32P1Q8NGA4 272 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 OR6N1Q8NGY5 312 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 TMEM158Q8WZ71 300 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 TXNDC15Q96J42 360 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 KCNS2Q9ULS6 477 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 POFUT2Q9Y2G5 429 aa18.22■□□□□ 0.51
VSX1-201ENST00000376707 IGHV4-61A0A0C4DH41 118 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 LOC100289279A0A1B0GTE1 492 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 LRRN3E7EW58 273 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 M0R3H8 397 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 HLA-HP01893 362 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 OPN1SWP03999 348 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 CD79AP11912 226 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 SNTB2Q13425 540 aaKnown RBP18.21■□□□□ 0.51
VSX1-201ENST00000376707 CAMK2DQ13557 499 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 DAG1Q14118 895 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 GSG1Q2KHT4 349 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 TRMT5Q32P41 509 aaKnown RBP18.21■□□□□ 0.51
VSX1-201ENST00000376707 COQ5Q5HYK3 327 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 FAM166AQ6J272 317 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 ZNF813Q6ZN06 617 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 SNX32Q86XE0 403 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 ULBP2Q9BZM5 246 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 NOX3Q9HBY0 568 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 DYNLRB1Q9NP97 96 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 ARFGEF3Q5TH69 2177 aa18.21■□□□□ 0.51
VSX1-201ENST00000376707 SH3PXD2BA1X283 911 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 PLPP3O14495 311 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 MT-ATP6P00846 226 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 TROVE2P10155 538 aaKnown RBP eCLIP18.2■□□□□ 0.5
VSX1-201ENST00000376707 CD247P20963 164 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 CYLC2Q14093 348 aaPredicted RBP18.2■□□□□ 0.5
VSX1-201ENST00000376707 NPTX1Q15818 432 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 INTS11Q5TA45 600 aaKnown RBP18.2■□□□□ 0.5
VSX1-201ENST00000376707 KRT80Q6KB66 452 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 NANOGP8Q6NSW7 305 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 NHLRC1Q6VVB1 395 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 PXKQ7Z7A4 578 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 OR6T1Q8NGN1 323 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 OR5J2Q8NH18 312 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 OR10A6Q8NH74 314 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 NEU4Q8WWR8 484 aaPredicted RBP18.2■□□□□ 0.5
VSX1-201ENST00000376707 TAMM41Q96BW9 452 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 DOK1Q99704 481 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 BPESC1Q9GZL8 116 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 CHODLQ9H9P2 273 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 NANOGQ9H9S0 305 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 B3GNT2Q9NY97 397 aa18.2■□□□□ 0.5
VSX1-201ENST00000376707 CPSF4LA6NMK7 179 aaKnown RBP18.19■□□□□ 0.5
VSX1-201ENST00000376707 FXYD1O00168 92 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 PHF1O43189 567 aaPredicted RBP18.19■□□□□ 0.5
VSX1-201ENST00000376707 CHP2O43745 196 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 OR6A2O95222 327 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 NPPAP01160 153 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 ADORA3P0DMS8 318 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 DAOP14920 347 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 B4GALT1P15291 398 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 PIGFQ07326 219 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 VMACQ2NL98 169 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 CCDC80Q76M96 950 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 PHC2Q8IXK0 858 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 ARIH2OSQ8N7S6 290 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 MSI2Q96DH6 328 aaKnown RBP18.19■□□□□ 0.5
VSX1-201ENST00000376707 SH3GL1Q99961 368 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 PCDHAC1Q9H158 963 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 FGFR1OP2Q9NVK5 253 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 ZNF446Q9NWS9 450 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 CMAHPQ9Y471 501 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 RTTNQ86VV8 2226 aa18.19■□□□□ 0.5
VSX1-201ENST00000376707 C11orf98E9PRG8 122 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 LYPD3O95274 346 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 STAMBPO95630 424 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 ZNF23P17027 643 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 IGFBP5P24593 272 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 CSNK1A1P48729 337 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 CRYBA2P53672 197 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 ENTPD8Q5MY95 495 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 CGB2Q6NT52 195 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 ZNF627Q7L945 461 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 CALHM3Q86XJ0 350 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 WDFY1Q8IWB7 410 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 CDK20Q8IZL9 346 aa18.18■□□□□ 0.5
VSX1-201ENST00000376707 ZCCHC24Q8N2G6 241 aaKnown RBP18.18■□□□□ 0.5
VSX1-201ENST00000376707 OR8J3Q8NGG0 315 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms