RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 RTL8BQ17RB0 113 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 HIST2H3AQ71DI3 136 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 OR10K1Q8NGX5 313 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 KCNG3Q8TAE7 436 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 APOOQ9BUR5 198 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 CHRNA9Q9UGM1 479 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 NOSIPQ9Y314 301 aaKnown RBP11.59□□□□□ -0.55
VPS13A-204ENST00000376634 CNR1P21554 472 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 ZP2Q05996 745 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 WDR5BQ86VZ2 330 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.59□□□□□ -0.55
VPS13A-204ENST00000376634 SLC6A18Q96N87 628 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 KIAA1456Q9P272 454 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 ABHD6Q9BV23 337 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 OR52D1Q9H346 318 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 NRIP3Q9NQ35 241 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 HTR2CP28335 458 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 PAGE3Q5JUK9 113 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 MISPQ8IVT2 679 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 NECAP2Q9NVZ3 263 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 BABAM2Q9NXR7 383 aa11.59□□□□□ -0.55
VPS13A-204ENST00000376634 TIMP1P01033 207 aa11.58□□□□□ -0.55
VPS13A-204ENST00000376634 B3GNT8Q7Z7M8 397 aa11.58□□□□□ -0.55
VPS13A-204ENST00000376634 NKAIN3Q8N8D7 197 aa11.58□□□□□ -0.55
VPS13A-204ENST00000376634 GPR62Q9BZJ7 368 aa11.58□□□□□ -0.55
VPS13A-204ENST00000376634 A0A0B4J2A0 478 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF593O00488 134 aaPredicted RBP11.58□□□□□ -0.56
VPS13A-204ENST00000376634 LFNGQ8NES3 379 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 SHPKQ9UHJ6 478 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 ABCA7Q8IZY2 2146 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 ARHGAP33O14559 1287 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF836Q6ZNA1 936 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 PARP16Q8N5Y8 322 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 LIPHQ8WWY8 451 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 TAAR2Q9P1P5 351 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 CBY1Q9Y3M2 126 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 A6NIN4 97 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 TERTO14746 1132 aaKnown RBP11.58□□□□□ -0.56
VPS13A-204ENST00000376634 OR2C1O95371 312 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 CEACAM7Q14002 265 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 OR5K2Q8NHB8 316 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 KHSRPQ92945 711 aaKnown RBP eCLIP11.58□□□□□ -0.561e-6■■■□□ 18.6
VPS13A-204ENST00000376634 FBXL4Q9UKA2 621 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 CLDN17P56750 224 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 SORBS1Q9BX66 1292 aaKnown RBP11.58□□□□□ -0.56
VPS13A-204ENST00000376634 TWSG1Q9GZX9 223 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 RIMS4Q9H426 269 aaPredicted RBP11.58□□□□□ -0.56
VPS13A-204ENST00000376634 ERVMER34-1Q9H9K5 563 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 STRCQ7RTU9 1775 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 A0A087WZY1 265 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 G3V2L1 256 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 TXNDC12O95881 172 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 F3P13726 295 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 RELAQ04206 551 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF582Q96NG8 517 aaPredicted RBP11.58□□□□□ -0.56
VPS13A-204ENST00000376634 GORASP2Q9H8Y8 452 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 PLCH1Q4KWH8 1693 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 PHF1O43189 567 aaPredicted RBP11.58□□□□□ -0.56
VPS13A-204ENST00000376634 FCRLAQ7L513 359 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF230Q9UIE0 474 aaPredicted RBP11.58□□□□□ -0.56
VPS13A-204ENST00000376634 GABRR3A8MPY1 467 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 ZNF732B4DXR9 585 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 KCNJ15Q99712 375 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 BARX1Q9HBU1 254 aaPredicted RBP11.58□□□□□ -0.56
VPS13A-204ENST00000376634 WDR81Q562E7 1941 aa11.58□□□□□ -0.56
VPS13A-204ENST00000376634 BCAT2O15382 392 aaPredicted RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 ADAM23O75077 832 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 HMGN2P05204 90 aaKnown RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 C18orf63Q68DL7 685 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 ADGRG5Q8IZF4 528 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 SIGLECL1Q8N7X8 197 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 OR52E1Q8NGJ3 308 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 TIMD4Q96H15 378 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 ALG12Q9BV10 488 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 RYDENQ9NUL5 291 aaKnown RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 RCE1Q9Y256 329 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 RGPD3A6NKT7 1758 aaPredicted RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 ABHD16AO95870 558 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 DCDP81605 110 aaKnown RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 SORDQ00796 357 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 PCK2Q16822 640 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 LYPD4Q6UWN0 246 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 H2BFWTQ7Z2G1 175 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 GALNT9Q9HCQ5 603 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 TMEM221A6NGB7 291 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 MAOBP27338 520 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 HBMQ6B0K9 141 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 OR8G2PQ6IF36 304 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 GDPD3Q7L5L3 318 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 NHLRC2Q8NBF2 726 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 NKX2-4Q9H2Z4 354 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 EXOSC3Q9NQT5 275 aaKnown RBP11.57□□□□□ -0.56
VPS13A-204ENST00000376634 CBY3A6NI87 242 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 FAM174AQ8TBP5 190 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 GGHQ92820 318 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 FBXW5Q969U6 566 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 C14orf79Q96F83 325 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 C16orf70Q9BSU1 422 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 GAB2Q9UQC2 676 aa11.57□□□□□ -0.56
VPS13A-204ENST00000376634 C4orf47A7E2U8 309 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms