RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 GJE1A6NN92 205 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 SLC25A27O95847 323 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 C1QAP02745 245 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 TYMSP04818 313 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 LIPCP11150 499 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 BCKDHBP21953 392 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 CBLP22681 906 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 MAGEA5P43359 124 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 SLC6A11P48066 632 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 PPT1P50897 306 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 DNAJB13P59910 316 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 PITX1P78337 314 aaPredicted RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 CRYZQ08257 329 aaKnown RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 SURF2Q15527 256 aaPredicted RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 VAMP3Q15836 100 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 ENPP7Q6UWV6 458 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 CEACAM20Q6UY09 585 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 UNC93AQ86WB7 457 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 CILP2Q8IUL8 1156 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 TMEM199Q8N511 208 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 INO80EQ8NBZ0 244 aaPredicted RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 OR51D1Q8NGF3 324 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 OR5AK3PQ8NH89 298 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 WDR36Q8NI36 951 aaKnown RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 SNRNP40Q96DI7 357 aaKnown RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 OR2V2Q96R30 315 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 OR5M11Q96RB7 305 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 OR8B4Q96RC9 309 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 BTBD10Q9BSF8 475 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 PPIL3Q9H2H8 161 aaKnown RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 CCDC182A6NF36 153 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 KCNK1O00180 336 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 TPST2O60704 377 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 DAP3P51398 398 aaKnown RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 TMEM225Q6GV28 225 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 HACD2Q6Y1H2 254 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 FAM220AQ7Z4H9 259 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 MTERF1Q99551 399 aaKnown RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 EPYCQ99645 322 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 CHST5Q9GZS9 411 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 REEP4Q9H6H4 257 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 ZNF346Q9UL40 294 aaKnown RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 ZNF490Q9ULM2 529 aaPredicted RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 ARL5AQ9Y689 179 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 RELNP78509 3460 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 ISPDA4D126 451 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 LDB2O43679 373 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 UGT2B11O75310 529 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 SMIM10L2AP0DMW4 78 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 SMIM10L2BP0DMW5 78 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 LMO2P25791 158 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 MTCP1P56278 107 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 IHHQ14623 411 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 WDR25Q64LD2 544 aaPredicted RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 RNF165Q6ZSG1 346 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 VN1R5Q7Z5H4 357 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 RNF149Q8NC42 400 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 OR51A7Q8NH64 312 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 OR2AE1Q8NHA4 323 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 OR14L1PQ8NHC6 308 aa8.18□□□□□ -1.1
UBR4-201ENST00000375218 NDRG1Q92597 394 aaKnown RBP8.18□□□□□ -1.1
UBR4-201ENST00000375218 CXorf65A6NEN9 183 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 APRTP07741 180 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 OR10J4P0C629 311 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 SOX2P48431 317 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 TTPAP49638 278 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 CXADRP78310 365 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 ACVR1Q04771 509 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 GRINAQ7Z429 371 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 NLRX1Q86UT6 975 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 KLHDC8AQ8IYD2 350 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 PTGR2Q8N8N7 351 aaPredicted RBP8.17□□□□□ -1.1
UBR4-201ENST00000375218 OR4F15Q8NGB8 312 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 ISOC2Q96AB3 205 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 PCGF1Q9BSM1 259 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 RETNQ9HD89 108 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 C2orf42Q9NWW7 574 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 FOXA2Q9Y261 457 aaPredicted RBP8.17□□□□□ -1.1
UBR4-201ENST00000375218 ANGPT4Q9Y264 503 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 RAP2CQ9Y3L5 183 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 MMP24Q9Y5R2 645 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 PEX16Q9Y5Y5 336 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 PRSS29PA6NIE9 313 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 SEC14L6B5MCN3 397 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 LATO43561 262 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 CKS1BP61024 79 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 GPR19Q15760 415 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 OR4F3Q6IEY1 312 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 TSTD1Q8NFU3 115 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 WDR20Q8TBZ3 569 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 SMARCD2Q92925 531 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 C10orf35Q96D05 121 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 TKTL2Q9H0I9 626 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 UBE2TQ9NPD8 197 aaPredicted RBP8.17□□□□□ -1.1
UBR4-201ENST00000375218 PACSIN3Q9UKS6 424 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 MRPS28Q9Y2Q9 187 aaKnown RBP8.17□□□□□ -1.1
UBR4-201ENST00000375218 KIF26AQ9ULI4 1882 aaPredicted RBP8.17□□□□□ -1.1
UBR4-201ENST00000375218 A0A0X1KG70 313 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 RGS14O43566 566 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms