RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 TMCO6Q96DC7 493 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 CEP19Q96LK0 163 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 SDHCQ99643 169 aaPredicted RBP4.35□□□□□ -1.71
USP48-202ENST00000374730 PRSS27Q9BQR3 290 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 SLC30A2Q9BRI3 323 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 NUDT22Q9BRQ3 303 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 BARHL1Q9BZE3 327 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 FN3KQ9H479 309 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 CD93Q9NPY3 652 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 CTPS2Q9NRF8 586 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 C14orf105Q9NVL8 296 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 TXNL4BQ9NX01 149 aaKnown RBP4.35□□□□□ -1.71
USP48-202ENST00000374730 QPCTLQ9NXS2 382 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 NLGN3Q9NZ94 848 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 MAT2BQ9NZL9 334 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 CNIH4Q9P003 139 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 ZNF229Q9UJW7 825 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 ZNF223Q9UK11 482 aaPredicted RBP4.35□□□□□ -1.71
USP48-202ENST00000374730 POMT2Q9UKY4 750 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 MMP17Q9ULZ9 603 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 TMEM5Q9Y2B1 443 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 CA5BQ9Y2D0 317 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 MRPS2Q9Y399 296 aaKnown RBP4.35□□□□□ -1.71
USP48-202ENST00000374730 SPIN1Q9Y657 262 aaPredicted RBP4.35□□□□□ -1.71
USP48-202ENST00000374730 V9GYH0 126 aa4.35□□□□□ -1.71
USP48-202ENST00000374730 LOC105369274A0A096LPK9 316 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 LOC102723532A0A0G2JNH3 316 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 TCRBV21S2A2A0A5A6 115 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 OR6C74A6NCV1 312 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 SYNDIG1LA6NDD5 238 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 OR5K3A6NET4 321 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 ZNF860A6NHJ4 632 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 ZNF814B7Z6K7 855 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 J3QRE1 110 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CTDSP2O14595 271 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 SLC30A4O14863 429 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 SEC14L5O43304 696 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 FGF17O60258 216 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 DOK2O60496 412 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 DNAJB6O75190 326 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 PTP4A3O75365 173 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 KCNK2O95069 426 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CDRT1O95170 752 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 RCBTB2O95199 551 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 APOA1P02647 267 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 IGHV4-34P06331 123 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 SLC35E2P0CK97 266 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 GLULP15104 373 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 NT5EP21589 574 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CFL1P23528 166 aaKnown RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 HTR2AP28223 471 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 GTF2E2P29084 291 aaKnown RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 TNFSF8P32971 234 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 GPR4P46093 362 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CAPZA2P47755 286 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 ZNF84P51523 738 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 RPS25P62851 125 aaKnown RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 SKP1P63208 163 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 IGLV3-21P80748 117 aaPredicted RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 SHC2P98077 582 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 DMWDQ09019 674 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 ZNF155Q12901 538 aaPredicted RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 CBX3Q13185 183 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 GPR50Q13585 617 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 OR1Q1Q15612 314 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 MAPK14Q16539 360 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 PRICKLE4Q2TBC4 344 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 TRMT12Q53H54 448 aaKnown RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 MRPL2Q5T653 305 aaKnown RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 OR2G6Q5TZ20 316 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 GARNL3Q5VVW2 1013 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 RUSC1-AS1Q66K80 236 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CCDC144NLQ6NUI1 221 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 SLC30A6Q6NXT4 461 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 ACSM6Q6P461 480 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 NIPAL3Q6P499 406 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 ZNF613Q6PF04 617 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 HSDL2Q6YN16 418 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 TMPRSS11AQ6ZMR5 421 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 Q6ZSR6 202 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 TMPRSS11FQ6ZWK6 438 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 DGLUCYQ7Z3D6 616 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 MEX3DQ86XN8 651 aaKnown RBP4.34□□□□□ -1.71
USP48-202ENST00000374730 EGFL6Q8IUX8 553 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 GRAMD2AQ8IUY3 354 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 OR4N4Q8N0Y3 316 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 SLC22A18ASQ8N1D0 253 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 CSNK1A1LQ8N752 337 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 ARIH2OSQ8N7S6 290 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 AVL9Q8NBF6 648 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 OR52L1Q8NGH7 329 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 RPLP0P6Q8NHW5 317 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 FANK1Q8TC84 345 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 GPR151Q8TDV0 419 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 SLC37A2Q8TED4 501 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 TMEM255BQ8WV15 326 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 TMEM239Q8WW34 195 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 OIT3Q8WWZ8 545 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 AP3S1Q92572 193 aa4.34□□□□□ -1.71
USP48-202ENST00000374730 KCTD7Q96MP8 289 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms