RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 TAMM41Q96BW9 452 aa16.41■□□□□ 0.22
TMEM53-201ENST00000372235 PIMREGQ9BSJ6 248 aa16.41■□□□□ 0.22
TMEM53-201ENST00000372235 PLK3Q9H4B4 646 aa16.41■□□□□ 0.22
TMEM53-201ENST00000372235 MED29Q9NX70 200 aa16.41■□□□□ 0.22
TMEM53-201ENST00000372235 STX18Q9P2W9 335 aaKnown RBP16.41■□□□□ 0.22
TMEM53-201ENST00000372235 LOC390937A0A1W2PQ73 354 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 A8MV72 311 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-201ENST00000372235 FBP2O00757 339 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 MRASO14807 208 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 RNF13O43567 381 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 SASH3O75995 380 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 HPRP00739 348 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 THRBP10828 461 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 HLA-DOBP13765 273 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 NPR2P20594 1047 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 USF1P22415 310 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-201ENST00000372235 LSP1P33241 339 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 GZMMP51124 257 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 IDH3GP51553 393 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-201ENST00000372235 VLDLRP98155 873 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 KRTAP1-1Q07627 177 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 NPRL3Q12980 569 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 CAMK2DQ13557 499 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 ADIPOQQ15848 244 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 ZNF566Q969W8 418 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 SLC25A44Q96H78 314 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-201ENST00000372235 FOXB1Q99853 325 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 VRK1Q99986 396 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-201ENST00000372235 WFDC6Q9BQY6 131 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 ZNF426Q9BUY5 554 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 EMC6Q9BV81 110 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 YAE1D1Q9NRH1 226 aa16.4■□□□□ 0.22
TMEM53-201ENST00000372235 ABCA2Q9BZC7 2435 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 CENPBD1B2RD01 187 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 C11orf98E9PRG8 122 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 FARS2O95363 451 aaKnown RBP16.39■□□□□ 0.21
TMEM53-201ENST00000372235 RAB36O95755 333 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 CH25HO95992 272 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 UMPSP11172 480 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 CD79AP11912 226 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 IFNGR1P15260 489 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 EVX1P49640 407 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 BIDP55957 195 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 TAS2R41P59536 307 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 RPS23P62266 143 aaKnown RBP16.39■□□□□ 0.21
TMEM53-201ENST00000372235 TUBA1BP68363 451 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 TUBA4AP68366 448 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 KLF10Q13118 480 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 TMEM249Q2WGJ8 235 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 VHLLQ6RSH7 139 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 TUBA1AQ71U36 451 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 SLC35D2Q76EJ3 337 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 ARPINQ7Z6K5 226 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 MDP1Q86V88 176 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 CALHM3Q86XJ0 350 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 NEU4Q8WWR8 484 aaPredicted RBP16.39■□□□□ 0.21
TMEM53-201ENST00000372235 TXNDC15Q96J42 360 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 FGFR1OP2Q9NVK5 253 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 TMEM160Q9NX00 188 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 GLTPQ9NZD2 209 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 SH3GLB1Q9Y371 365 aa16.39■□□□□ 0.21
TMEM53-201ENST00000372235 IGHV2OR16-5A0A0B4J2B6 119 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 SERPINI2O75830 405 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 OR5F1O95221 314 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 MT-ND1P03886 318 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 NR2C1P13056 603 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 CALCRP30988 508 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 GALK2Q01415 458 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 DAG1Q14118 895 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 NRN1LQ496H8 165 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 CYB5R2Q6BCY4 276 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 REP15Q6BDI9 236 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 NHLRC1Q6VVB1 395 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 NANOGNBQ7Z5D8 188 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 HIPK1Q86Z02 1210 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 LZICQ8WZA0 190 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 ZNF837Q96EG3 531 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-201ENST00000372235 SAR1AQ9NR31 198 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 B3GNT2Q9NY97 397 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 TAS2R5Q9NYW4 299 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 CMAHPQ9Y471 501 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 NAV3Q8IVL0 2385 aa16.38■□□□□ 0.21
TMEM53-201ENST00000372235 NSD1Q96L73 2696 aaPredicted RBP16.37■□□□□ 0.21
TMEM53-201ENST00000372235 A0A1W2PRG6 482 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 SLC22A23A1A5C7 686 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 BCL10O95999 233 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 PTHP01270 115 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 IGHG1P01857 330 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 ASAH2BP0C7U1 165 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 GZMKP49863 264 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 LSM11P83369 360 aaKnown RBP eCLIP16.37■□□□□ 0.21
TMEM53-201ENST00000372235 CHRFAM7AQ494W8 412 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 RABL3Q5HYI8 236 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 PHYHD1Q5SRE7 291 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 PODNL1Q6PEZ8 512 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 CARM1Q86X55 608 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 TMEM54Q969K7 222 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 SORCS2Q96PQ0 1159 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 C1orf198Q9H425 327 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 CCDC134Q9H6E4 229 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms