RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 IFT27Q9BW83 186 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 RIBC2Q9H4K1 309 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 CLMPQ9H6B4 373 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 RANBP3Q9H6Z4 567 aaPredicted RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 H2AFY2Q9P0M6 372 aaPredicted RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 FZR1Q9UM11 496 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 ATRQ13535 2644 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 ZC3H12DA2A288 527 aaKnown RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 LOC110117498-PIK3R3F6TDL0 507 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 ABCD4O14678 606 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 SUSD5O60279 629 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 TRIM3O75382 744 aaPredicted RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 SCO1O75880 301 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 CLPXO76031 633 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 TP53P04637 393 aaPredicted RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 CNR1P21554 472 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 EEF1B2P24534 225 aaKnown RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 LINC00303Q3SY05 128 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 ZNF628Q5EBL2 1059 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 TMEM205Q6UW68 189 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 CDH24Q86UP0 819 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 KIF18BQ86Y91 864 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 ZNF843Q8N446 348 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 SLC24A4Q8NFF2 622 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 OR6F1Q8NGZ6 308 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 CYGBQ8WWM9 190 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 HAS2Q92819 552 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 RFKQ969G6 155 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 RTN4RQ9BZR6 473 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 SLC22A4Q9H015 551 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 RNF32Q9H0A6 362 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 REEP1Q9H902 201 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 NKIRAS2Q9NYR9 191 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 CALML5Q9NZT1 146 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 ZNF223Q9UK11 482 aaPredicted RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 PCDHGB6Q9Y5F9 930 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 UBR5O95071 2799 aaPredicted RBP6.35□□□□□ -1.39
USP1-202ENST00000371146 ITPR2Q14571 2701 aa6.35□□□□□ -1.39
USP1-202ENST00000371146 TMED7-TICAM2A0A0A6YYA0 188 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 HMGN4O00479 90 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 RNASET2O00584 256 aaKnown RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 PSKH1P11801 424 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 ACVR2AP27037 513 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 RPS27P42677 84 aaKnown RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 CAPZA1P52907 286 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 ZNF117Q03924 483 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 ZNF91Q05481 1191 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 CBFBQ13951 182 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 VMACQ2NL98 169 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 SAMD4BQ5PRF9 694 aaKnown RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 TTC33Q6PID6 262 aaPredicted RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 GDF7Q7Z4P5 450 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 LHFPL3Q86UP9 236 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 NRMQ8IXM6 262 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 C10orf111Q8N326 155 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 SLC43A2Q8N370 569 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 OR5T2Q8NGG2 359 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 ZNF681Q96N22 645 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 PIGQQ9BRB3 760 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 PAPOLGQ9BWT3 736 aaKnown RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 OPN3Q9H1Y3 402 aaPredicted RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 ACSS1Q9NUB1 689 aaPredicted RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 THUMPD1Q9NXG2 353 aaKnown RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 TMED7Q9Y3B3 224 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 ORC6Q9Y5N6 252 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 FAM220BPB1ANY3 271 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 HCN1O60741 890 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 ATP1B1P05026 303 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 GYPBP06028 91 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 SMIM6P0DI80 62 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 SMIM10L1P0DMW3 83 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 DDOSTP39656 456 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 GSK3AP49840 483 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 UBE2NP61088 152 aaKnown RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 DCAF7P61962 342 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 TRA2BP62995 288 aaKnown RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 CTU2Q2VPK5 515 aaKnown RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 DNAL1Q4LDG9 190 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 FAM98BQ52LJ0 330 aaKnown RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 ELP2Q6IA86 826 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 TMEM81Q6P7N7 255 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 SLC22A25Q6T423 547 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 ETV3LQ6ZN32 361 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 OAFQ86UD1 273 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 OFCC1Q8IZS5 231 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 LRRC17Q8N6Y2 441 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 KDF1Q8NAX2 398 aaPredicted RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 OR6T1Q8NGN1 323 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 OR10D3Q8NH80 312 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 ST8SIA2Q92186 375 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 NRGNQ92686 78 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 PNPLA2Q96AD5 504 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 SMIM10Q96HG1 83 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 OR51M1Q9H341 326 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 BTNL2Q9UIR0 455 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 UNC79Q9P2D8 2635 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 SERTM1A2A2V5 107 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 ZNF729A6NN14 1252 aaPredicted RBP6.34□□□□□ -1.39
USP1-202ENST00000371146 H3BMQ9 156 aa6.34□□□□□ -1.39
USP1-202ENST00000371146 RGS9O75916 674 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms