RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CLECL1Q8IZS7 167 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 PARP8Q8N3A8 854 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 OR52E2Q8NGJ4 325 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 SFXN5Q8TD22 340 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 CCL17Q92583 94 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 RAB1CQ92928 201 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 MTERF3Q96E29 417 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 METTL2AQ96IZ6 378 aaKnown RBP7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 PAIP2Q9BPZ3 127 aaKnown RBP7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 FUT8Q9BYC5 575 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 OR51B6Q9H340 312 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 OR51I1Q9H343 314 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZDHHC18Q9NUE0 388 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 ASH2LQ9UBL3 628 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZNF346Q9UL40 294 aaKnown RBP7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 RCE1Q9Y256 329 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 SLC35A3Q9Y2D2 325 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 RNF114Q9Y508 228 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 NOX1Q9Y5S8 564 aa7.13□□□□□ -1.27
HMGB1P39-201ENST00000366304 SCO2A0A1W2PP80 73 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 ISPDA4D126 451 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 M0R3G1 203 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZSCAN12O43309 604 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 NPIPB7O75200 414 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 FOXH1O75593 365 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 IGHV2-70P01814 119 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 INHBAP08476 426 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 KRT16P08779 473 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 OR8G3PP0DMU2 310 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 OR12D1P0DN82 309 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 THRBP10828 461 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 PNMTP11086 282 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 B4GALT1P15291 398 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 GCAP28676 217 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 HTR3AP46098 478 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 MTNR1AP48039 350 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 SLC6A9P48067 706 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 EPS8Q12929 822 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 CHI3L2Q15782 390 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 HFEQ30201 348 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 PCGF3Q3KNV8 242 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 XP32Q5T750 250 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 TNFAIP8L2Q6P589 184 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 NHLRC1Q6VVB1 395 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 SYT10Q6XYQ8 523 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 DACT3Q96B18 629 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 UPRTQ96BW1 309 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 COQ8BQ96D53 544 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 PRPF18Q99633 342 aaKnown RBP7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 PTDSS2Q9BVG9 487 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 TCF7L1Q9HCS4 588 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 AURKAIP1Q9NWT8 199 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 WDR45Q9Y484 360 aa7.12□□□□□ -1.27
HMGB1P39-201ENST00000366304 TRAV40A0A0B4J280 105 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZSCAN5BA6NJL1 495 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 A8MXK9 166 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 TMEM233B4DJY2 109 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 F5H0A9 414 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 POC1B-GALNT4F8VUJ3 575 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 SLC28A1O00337 649 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 FAAHO00519 579 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 TM9SF1O15321 606 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 ATP8B1O43520 1251 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 AK1P00568 194 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 HPRP00739 348 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 IGHV1-46P01743 117 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 MELTFP08582 738 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 SBK2P0C263 348 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 GKN3PP0CG01 181 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 UROSP10746 265 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 PRG2P13727 222 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 HLA-DOBP13765 273 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 SOAT1P35610 550 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 HPCAL1P37235 193 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 ACAA2P42765 397 aaKnown RBP7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 KLF3P57682 345 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 RPS23P62266 143 aaKnown RBP7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 RAB1AP62820 205 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 EGR4Q05215 589 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 MFSD13AQ14CX5 517 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 FAM153CQ494X1 144 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 MMEL1Q495T6 779 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 GALNTL6Q49A17 601 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 C1orf140Q5VVS0 124 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 CARD17Q5XLA6 110 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 RUSC1-AS1Q66K80 236 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 RGS7BPQ6MZT1 257 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 Q6YL49 198 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZNF813Q6ZN06 617 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 ZNF627Q7L945 461 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 C16orf62Q7Z3J2 963 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 REC114Q7Z4M0 266 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 SKA3Q8IX90 412 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 RIMKLAQ8IXN7 391 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 CMIPQ8IY22 773 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 CCDC36Q8IYA8 594 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 GPR137CQ8N3F9 429 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 POU5F2Q8N7G0 328 aa7.11□□□□□ -1.27
HMGB1P39-201ENST00000366304 ANKFN1Q8N957 763 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms