RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 SGCGQ13326 291 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 NFATC4Q14934 902 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 CPSF6Q16630 551 aaKnown RBP eCLIP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 SLC25A35Q3KQZ1 300 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 SLC25A30Q5SVS4 291 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 DCAF12L2Q5VW00 463 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 RAB12Q6IQ22 244 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 MED27Q6P2C8 311 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 FAM111BQ6SJ93 734 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 APOOLQ6UXV4 268 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 TMEM64Q6YI46 380 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 UBE2R2Q712K3 238 aaPredicted RBP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 PARS2Q7L3T8 475 aaKnown RBP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 OR4Q3Q8NH05 313 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 HAVCR2Q8TDQ0 301 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 SORCS1Q8WY21 1168 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 OSTF1Q92882 214 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 RAB3CQ96E17 227 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 ZNF354BQ96LW1 612 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 ZNF75AQ96N20 296 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 CCNL2Q96S94 520 aaPredicted RBP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 PKP4Q99569 1192 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 AIF1LQ9BQI0 150 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 DUSP26Q9BV47 211 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 MRPL37Q9BZE1 423 aaKnown RBP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 SMG9Q9H0W8 520 aaKnown RBP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 KLHL31Q9H511 634 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 TREM1Q9NP99 234 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 SMCO4Q9NRQ5 59 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 ASB6Q9NWX5 421 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 VSX1Q9NZR4 365 aaPredicted RBP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 STOX2Q9P2F5 926 aaPredicted RBP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 ZNF282Q9UDV7 671 aaPredicted RBP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 EXOSC1Q9Y3B2 195 aaKnown RBP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 ENPP4Q9Y6X5 453 aa3.65□□□□□ -1.82
CNGA1-201ENST00000358519 TNRC6BQ9UPQ9 1833 aaKnown RBP3.65□□□□□ -1.82
CNGA1-201ENST00000358519 TMEM72A0PK05 275 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 TRAPPC13A5PLN9 417 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 OR14I1A6ND48 311 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 IQCF5A8MTL0 148 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 F5H5P2 479 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 RNASET2O00584 256 aaKnown RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 FFAR1O14842 300 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 TM4SF5O14894 197 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 PGRMC2O15173 223 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 MED6O75586 246 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 FARS2O95363 451 aaKnown RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 CLDN7O95471 211 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 AK1P00568 194 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 MT-ND4LP03901 98 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 CD2P06729 351 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 UCHL1P09936 223 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 C6P13671 934 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 NME1P15531 152 aaKnown RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 HIST1H1BP16401 226 aaKnown RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 HNRNPA2B1P22626 353 aaKnown RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 PAX6P26367 422 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 CCR7P32248 378 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 CRATP43155 626 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 RAB5CP51148 216 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 LUMP51884 338 aaPredicted RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 UBE2MP61081 183 aaKnown RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 REEP5Q00765 189 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 TCEA2Q15560 299 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 USF2Q15853 346 aaPredicted RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 FAM27D1Q5T7N8 215 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 AGBL4Q5VU57 503 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 TCEAL6Q6IPX3 200 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 HEPHL1Q6MZM0 1159 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 ACSM5Q6NUN0 579 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 ANGPTL8Q6UXH0 198 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 ZNF852Q6ZMS4 543 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 MBOAT1Q6ZNC8 495 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 ZNF546Q86UE3 836 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 TMEM200AQ86VY9 491 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 AMZ2Q86W34 360 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 CCDC54Q8NEL0 328 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 WFDC5Q8TCV5 224 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 SMIM4Q8WVI0 70 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 GEMIN6Q8WXD5 167 aaKnown RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 CLDN23Q96B33 292 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 MYEOVQ96EZ4 313 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 APIPQ96GX9 242 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 LOXL4Q96JB6 756 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 APOLD1Q96LR9 279 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 WDR92Q96MX6 357 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 TEFMQ96QE5 360 aaKnown RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 MYADMQ96S97 322 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 ZDHHC5Q9C0B5 715 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 DUSP15Q9H1R2 295 aaPredicted RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 TMEM231Q9H6L2 316 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 TMEM185BQ9H7F4 350 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 ACKR4Q9NPB9 350 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 UQCC1Q9NVA1 299 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 MRPS18AQ9NVS2 196 aaKnown RBP3.65□□□□□ -1.83
CNGA1-201ENST00000358519 CALML5Q9NZT1 146 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 SUSD2Q9UGT4 822 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 CAMK2AQ9UQM7 478 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 TP53TG5Q9Y2B4 290 aa3.65□□□□□ -1.83
CNGA1-201ENST00000358519 NAV2Q8IVL1 2488 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms