RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 WFIKKN2Q8TEU8 576 aa9.24□□□□□ -0.93
PTPRA-203ENST00000356147 TSACCQ96A04 125 aaPredicted RBP9.24□□□□□ -0.93
PTPRA-203ENST00000356147 SPACA7Q96KW9 195 aa9.24□□□□□ -0.93
PTPRA-203ENST00000356147 SRMSQ9H3Y6 488 aa9.24□□□□□ -0.93
PTPRA-203ENST00000356147 WDR76Q9H967 626 aa9.24□□□□□ -0.93
PTPRA-203ENST00000356147 RXFP3Q9NSD7 469 aa9.24□□□□□ -0.93
PTPRA-203ENST00000356147 DNAJB12Q9NXW2 375 aaKnown RBP9.24□□□□□ -0.93
PTPRA-203ENST00000356147 EMC3Q9P0I2 261 aa9.24□□□□□ -0.93
PTPRA-203ENST00000356147 ENTPD2Q9Y5L3 495 aa9.24□□□□□ -0.93
PTPRA-203ENST00000356147 TICRRQ7Z2Z1 1910 aa9.24□□□□□ -0.93
PTPRA-203ENST00000356147 TRAV14DV4A0A0A6YYC5 116 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 OR6C65A6NJZ3 312 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 SNRPGP15A8MWD9 76 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 HPP00738 406 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 GAS6Q14393 721 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 TAF13Q15543 124 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 TMEM31Q5JXX7 168 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 FHL5Q5TD97 284 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 SLC39A5Q6ZMH5 540 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 SLC35D2Q76EJ3 337 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 SLC2A12Q8TD20 617 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 NKD1Q969G9 470 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 AMELYQ99218 206 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 KLHDC3Q9BQ90 382 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 ZNF471Q9BX82 626 aaPredicted RBP9.23□□□□□ -0.93
PTPRA-203ENST00000356147 LMAN2LQ9H0V9 348 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 RNF208Q9H0X6 261 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 SLITRK2Q9H156 845 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 LRIT1Q9P2V4 623 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 SERTAD3Q9UJW9 196 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 CDV3Q9UKY7 258 aaKnown RBP9.23□□□□□ -0.93
PTPRA-203ENST00000356147 PRUNE2Q8WUY3 3088 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 A0A1W2PQU0 124 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 POM121BA6NF01 834 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 TUBAL3A6NHL2 446 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 C17orf51A8MQB3 221 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 IL5P05113 134 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 POU3F4P49335 361 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 SGCGQ13326 291 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 CST6Q15828 149 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 Q499Y3 187 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 UNQ6126/PRO20091Q6UXV3 157 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 SLC35F3Q8IY50 421 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 FRMD1Q8N878 549 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 MRPL43Q8N983 215 aaKnown RBP9.23□□□□□ -0.93
PTPRA-203ENST00000356147 POMGNT2Q8NAT1 580 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 OR4C3Q8NH37 302 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 ASB12Q8WXK4 309 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.23□□□□□ -0.93
PTPRA-203ENST00000356147 TINAGL1Q9GZM7 467 aaPredicted RBP9.23□□□□□ -0.93
PTPRA-203ENST00000356147 PLCL2Q9UPR0 1127 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 SLC22A7Q9Y694 548 aa9.23□□□□□ -0.93
PTPRA-203ENST00000356147 H7C417 338 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 OR10H2O60403 315 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ALOX12BO75342 701 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ITGA5P08648 1049 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 MPGP29372 298 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 CCKBRP32239 447 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 GMFBP60983 142 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 PPP1CAP62136 330 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 PSG6Q00889 435 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 IL10RAQ13651 578 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 UBXN2BQ14CS0 331 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 LINC01590Q5TEZ4 76 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ARHGAP40Q5TG30 622 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 USP53Q70EK8 1073 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ZNF627Q7L945 461 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 CBLN2Q8IUK8 224 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 CLRN3Q8NCR9 226 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 MOGAT1Q96PD6 335 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 OR2A5Q96R48 311 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 TMPRSS13Q9BYE2 586 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ATG5Q9H1Y0 275 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 MKKSQ9NPJ1 570 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-203ENST00000356147 MTFP1Q9UDX5 166 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 SLC27A6Q9Y2P4 619 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 CFAP54Q96N23 3096 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ELOA3DA6NLF2 546 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-203ENST00000356147 GPRIN2O60269 458 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 PRAMEF2O60811 474 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 UPK3AO75631 287 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 CTAG2O75638 210 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 RAB40ALP0C0E4 278 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ZNF28P17035 718 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ALKBH1Q13686 389 aaKnown RBP9.22□□□□□ -0.93
PTPRA-203ENST00000356147 PRICKLE4Q2TBC4 344 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 DEFB115Q30KQ5 88 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ELOA3BQ3SY89 546 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 FAM78AQ5JUQ0 283 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 CLVS2Q5SYC1 327 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 NKAIN2Q5VXU1 208 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 FAM220AQ7Z4H9 259 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 HSD17B13Q7Z5P4 300 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-203ENST00000356147 LRRTM1Q86UE6 522 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 BEST3Q8N1M1 668 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 GALNT16Q8N428 558 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 ELOA3Q8NG57 546 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 OR1J2Q8NGS2 313 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 OR10Z1Q8NGY1 313 aa9.22□□□□□ -0.93
PTPRA-203ENST00000356147 TSEN15Q8WW01 171 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms