RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 NR0B2Q15466 257 aa17.24■□□□□ 0.35
PRPF39-201ENST00000355765 GTPBP8Q8N3Z3 284 aaPredicted RBP17.24■□□□□ 0.35
PRPF39-201ENST00000355765 ULBP3Q9BZM4 244 aa17.24■□□□□ 0.35
PRPF39-201ENST00000355765 ETV7Q9Y603 341 aa17.24■□□□□ 0.35
PRPF39-201ENST00000355765 LOC100509620A0A075B734 347 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 SNAPINO95295 136 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 RPL4P36578 427 aaKnown RBP17.23■□□□□ 0.35
PRPF39-201ENST00000355765 MNDAP41218 407 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 BTN3A2P78410 334 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 ARHGAP11BQ3KRB8 267 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 ZNF511Q8NB15 262 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 OR5M8Q8NGP6 311 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 C15orf40Q8WUR7 153 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 RNF166Q96A37 237 aaPredicted RBP17.23■□□□□ 0.35
PRPF39-201ENST00000355765 TAS2R8Q9NYW2 309 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 APOBEC3BQ9UH17 382 aaKnown RBP17.23■□□□□ 0.35
PRPF39-201ENST00000355765 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.23■□□□□ 0.35
PRPF39-201ENST00000355765 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.23■□□□□ 0.35
PRPF39-201ENST00000355765 PMS2P2O95744 297 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 CD34P28906 385 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 NTHL1P78549 312 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 PRDX1Q06830 199 aaKnown RBP17.23■□□□□ 0.35
PRPF39-201ENST00000355765 HABP2Q14520 560 aaPredicted RBP17.23■□□□□ 0.35
PRPF39-201ENST00000355765 ARHGAP19Q14CB8 494 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 Q499Y3 187 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 TMEM35AQ53FP2 167 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 TRMT12Q53H54 448 aaKnown RBP17.23■□□□□ 0.35
PRPF39-201ENST00000355765 SLC35F3Q8IY50 421 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 GALNT16Q8N428 558 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 ZSCAN1Q8NBB4 408 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 DMBX1Q8NFW5 382 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 OR4K14Q8NGD5 310 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 OR51A4Q8NGJ6 313 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 ZNF514Q96K75 400 aaPredicted RBP17.23■□□□□ 0.35
PRPF39-201ENST00000355765 CNTNAP3BQ96NU0 1288 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 PCBD2Q9H0N5 130 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 SFXN1Q9H9B4 322 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 CHRNA9Q9UGM1 479 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 CDV3Q9UKY7 258 aaKnown RBP17.23■□□□□ 0.35
PRPF39-201ENST00000355765 ALPK2Q86TB3 2170 aa17.23■□□□□ 0.35
PRPF39-201ENST00000355765 CPED1A4D0V7 1026 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 SCAMP1O15126 338 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 ITGB2P05107 769 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 DIO1P49895 249 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 SCGB2B2Q4G0G5 96 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 LY6G5CQ5SRR4 150 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 ACOT7LQ6ZUV0 252 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 ZNF227Q86WZ6 799 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 GABRG1Q8N1C3 465 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 OR4A4PQ8NGN8 299 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 OR2A1Q8NGT9 310 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 CCDC107Q8WV48 283 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 TCEAL3Q969E4 200 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 RASD2Q96D21 266 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 FLRT3Q9NZU0 649 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 DNAH14Q0VDD8 3507 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 GXYLT2A0PJZ3 443 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 SULT2B1O00204 365 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 CD8AP01732 235 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 PRSS3P35030 304 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 PSMD4P55036 377 aaKnown RBP17.22■□□□□ 0.35
PRPF39-201ENST00000355765 PLAURQ03405 335 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 DHRS2Q13268 280 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 LIPNQ5VXI9 398 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 OR2L5Q8NG80 312 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 OR1J4Q8NGS1 313 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 OR5AK2Q8NH90 309 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 PHOSPHO1Q8TCT1 267 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 ZNF251Q9BRH9 671 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 CREBZFQ9NS37 354 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 MBD2Q9UBB5 411 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 ALOX12BO75342 701 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 AMY2AP04746 511 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 NID1P14543 1247 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 SPI1P17947 270 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 LAG3P18627 525 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 ZNF345Q14585 488 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 ZIC1Q15915 447 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 ENPP7Q6UWV6 458 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 ZNF704Q6ZNC4 412 aaPredicted RBP17.22■□□□□ 0.35
PRPF39-201ENST00000355765 SHISA5Q8N114 240 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 ZNF619Q8N2I2 560 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 CLEC1AQ8NC01 280 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 PHYHIPLQ96FC7 376 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 TSSK2Q96PF2 358 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 LGR4Q9BXB1 951 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 GPR34Q9UPC5 381 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 FARSAQ9Y285 508 aaKnown RBP17.22■□□□□ 0.35
PRPF39-201ENST00000355765 KLHDC2Q9Y2U9 406 aa17.22■□□□□ 0.35
PRPF39-201ENST00000355765 TBC1D3KA0A087X1G2 549 aa17.21■□□□□ 0.35
PRPF39-201ENST00000355765 A0A1B0GWA3 101 aa17.21■□□□□ 0.35
PRPF39-201ENST00000355765 TMEM72A0PK05 275 aa17.21■□□□□ 0.35
PRPF39-201ENST00000355765 TBC1D3BA6NDS4 549 aa17.21■□□□□ 0.35
PRPF39-201ENST00000355765 TBC1D3FA6NER0 549 aaPredicted RBP17.21■□□□□ 0.35
PRPF39-201ENST00000355765 RAB3DO95716 219 aa17.21■□□□□ 0.35
PRPF39-201ENST00000355765 EFEMP2O95967 443 aa17.21■□□□□ 0.35
PRPF39-201ENST00000355765 CD1AP06126 327 aa17.21■□□□□ 0.35
PRPF39-201ENST00000355765 POU3F4P49335 361 aa17.21■□□□□ 0.35
PRPF39-201ENST00000355765 DCST2Q5T1A1 773 aa17.21■□□□□ 0.35
PRPF39-201ENST00000355765 PRAMEF17Q5VTA0 474 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms