RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 CHST11Q9NPF2 352 aa23.11■■□□□ 1.29
CLK2-201ENST00000355560 CRNNQ9UBG3 495 aaPredicted RBP23.11■■□□□ 1.29
CLK2-201ENST00000355560 POLHQ9Y253 713 aa23.11■■□□□ 1.29
CLK2-201ENST00000355560 TVP23AA6NH52 213 aa23.1■■□□□ 1.29
CLK2-201ENST00000355560 PRR33A8MZF0 331 aa23.1■■□□□ 1.29
CLK2-201ENST00000355560 C21orf140B9A014 251 aa23.1■■□□□ 1.29
CLK2-201ENST00000355560 TNFSF15O95150 251 aa23.1■■□□□ 1.29
CLK2-201ENST00000355560 EIF1P41567 113 aaKnown RBP23.1■■□□□ 1.29
CLK2-201ENST00000355560 HSF2Q03933 536 aa23.1■■□□□ 1.29
CLK2-201ENST00000355560 MRPL48Q96GC5 212 aaKnown RBP23.1■■□□□ 1.29
CLK2-201ENST00000355560 C5orf34Q96MH7 638 aa23.1■■□□□ 1.29
CLK2-201ENST00000355560 GPR87Q9BY21 358 aa23.1■■□□□ 1.29
CLK2-201ENST00000355560 KCNN2Q9H2S1 579 aa23.1■■□□□ 1.29
CLK2-201ENST00000355560 ACOXLQ9NUZ1 547 aa23.1■■□□□ 1.29
CLK2-201ENST00000355560 ANKRD10Q9NXR5 420 aa23.1■■□□□ 1.29
CLK2-201ENST00000355560 SMIM30A4D0T7 59 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 DVL2O14641 736 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 OPN1LWP04000 364 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 ZP4Q12836 540 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 DMKNQ6E0U4 476 aaPredicted RBP23.09■■□□□ 1.29
CLK2-201ENST00000355560 ZBTB8AQ96BR9 441 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 PGLYRP3Q96LB9 341 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 SNX18Q96RF0 628 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 ST6GALNAC2Q9UJ37 374 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 B3GNT3Q9Y2A9 372 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 CTDSP2O14595 271 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 CASKO14936 926 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 AKR7A3O95154 331 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 SERPINA7P05543 415 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 CD53P19397 219 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 ADH6P28332 368 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 GBX2P52951 348 aaPredicted RBP23.09■■□□□ 1.29
CLK2-201ENST00000355560 MDGA2Q7Z553 956 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 JSRP1Q96MG2 331 aaPredicted RBP23.09■■□□□ 1.29
CLK2-201ENST00000355560 VSX1Q9NZR4 365 aaPredicted RBP23.09■■□□□ 1.29
CLK2-201ENST00000355560 FKBP7Q9Y680 259 aa23.09■■□□□ 1.29
CLK2-201ENST00000355560 EP300Q09472 2414 aaPredicted RBP23.09■■□□□ 1.29
CLK2-201ENST00000355560 SNPHO15079 494 aa23.08■■□□□ 1.29
CLK2-201ENST00000355560 SELENBP1Q13228 472 aa23.08■■□□□ 1.29
CLK2-201ENST00000355560 GLRX5Q86SX6 157 aa23.08■■□□□ 1.29
CLK2-201ENST00000355560 SGCZQ96LD1 299 aa23.08■■□□□ 1.29
CLK2-201ENST00000355560 GNRHR2Q96P88 292 aa23.08■■□□□ 1.29
CLK2-201ENST00000355560 B3GALT5Q9Y2C3 310 aa23.08■■□□□ 1.29
CLK2-201ENST00000355560 RPH3AQ9Y2J0 694 aaPredicted RBP23.08■■□□□ 1.29
CLK2-201ENST00000355560 MRPS18BQ9Y676 258 aaKnown RBP23.08■■□□□ 1.29
CLK2-201ENST00000355560 IQCMA0A1B0GVH7 501 aa23.08■■□□□ 1.28
CLK2-201ENST00000355560 PSMD9O00233 223 aa23.08■■□□□ 1.28
CLK2-201ENST00000355560 TERTO14746 1132 aaKnown RBP23.08■■□□□ 1.28
CLK2-201ENST00000355560 RAD1O60671 282 aa23.08■■□□□ 1.28
CLK2-201ENST00000355560 GPANK1O95872 356 aa23.08■■□□□ 1.28
CLK2-201ENST00000355560 POU3F1Q03052 451 aaPredicted RBP23.08■■□□□ 1.28
CLK2-201ENST00000355560 H3F3CQ6NXT2 135 aa23.08■■□□□ 1.28
CLK2-201ENST00000355560 OR1J4Q8NGS1 313 aa23.08■■□□□ 1.28
CLK2-201ENST00000355560 OR6N2Q8NGY6 317 aa23.08■■□□□ 1.28
CLK2-201ENST00000355560 FNDC8Q8TC99 324 aa23.08■■□□□ 1.28
CLK2-201ENST00000355560 UBL7Q96S82 380 aaPredicted RBP23.08■■□□□ 1.28
CLK2-201ENST00000355560 QPCTLQ9NXS2 382 aa23.08■■□□□ 1.28
CLK2-201ENST00000355560 SHISA3A0PJX4 238 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 PRR32B1ATL7 298 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 NPIPA5E9PKD4 350 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 RGS5O15539 181 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 GAAP10253 952 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 LIFP15018 202 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 IFNGR1P15260 489 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 DPP4P27487 766 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 CDK5R1Q15078 307 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 TRAM1Q15629 374 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 SNX29P2Q8IUI4 249 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 DEFB124Q8NES8 71 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 SLC25A43Q8WUT9 341 aaPredicted RBP23.07■■□□□ 1.28
CLK2-201ENST00000355560 NTNG2Q96CW9 530 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 OR5B2Q96R09 309 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 WDR76Q9H967 626 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 NPIPA1Q9UND3 350 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 B9D1Q9UPM9 204 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 KLHDC2Q9Y2U9 406 aa23.07■■□□□ 1.28
CLK2-201ENST00000355560 A0A087WZY1 265 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 A0A1W2PNR3 127 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 SLC22A23A1A5C7 686 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 TAF4O00268 1085 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 SLC16A7O60669 478 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 SFTPDP35247 375 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 DAP3P51398 398 aaKnown RBP23.06■■□□□ 1.28
CLK2-201ENST00000355560 PPP5CP53041 499 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 SIRPAP78324 504 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 ATP1A4Q13733 1029 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 ACER2Q5QJU3 275 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 CDC20BQ86Y33 519 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 GHSRQ92847 366 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 SMIM19Q96E16 107 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 INTS14Q96SY0 518 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 RYDENQ9NUL5 291 aaKnown RBP23.06■■□□□ 1.28
CLK2-201ENST00000355560 PLEKHB1Q9UF11 243 aaPredicted RBP23.06■■□□□ 1.28
CLK2-201ENST00000355560 MED12Q93074 2177 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 LOC101059948A0A1B0GTJ6 334 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 CTLA4P16410 223 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 SHC1P29353 583 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 HSF1Q00613 529 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 STPG1Q5TH74 334 aa23.06■■□□□ 1.28
CLK2-201ENST00000355560 TUBA3EQ6PEY2 450 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms