RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 XPAP23025 273 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 PCGF2P35227 344 aa5□□□□□ -1.61
CD47-201ENST00000355354 KIR3DL2P43630 455 aa5□□□□□ -1.61
CD47-201ENST00000355354 TSFMP43897 325 aaKnown RBP5□□□□□ -1.61
CD47-201ENST00000355354 ANXA11P50995 505 aaKnown RBP5□□□□□ -1.61
CD47-201ENST00000355354 SUPT4H1P63272 117 aaKnown RBP5□□□□□ -1.61
CD47-201ENST00000355354 EEF1A1P68104 462 aaKnown RBP5□□□□□ -1.61
CD47-201ENST00000355354 FADDQ13158 208 aa5□□□□□ -1.61
CD47-201ENST00000355354 CLN3Q13286 438 aa5□□□□□ -1.61
CD47-201ENST00000355354 COQ5Q5HYK3 327 aa5□□□□□ -1.61
CD47-201ENST00000355354 PHYHD1Q5SRE7 291 aa5□□□□□ -1.61
CD47-201ENST00000355354 PWWP2BQ6NUJ5 590 aa5□□□□□ -1.61
CD47-201ENST00000355354 INO80CQ6PI98 192 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 USP45Q70EL2 814 aa5□□□□□ -1.61
CD47-201ENST00000355354 ZNF765Q7L2R6 523 aa5□□□□□ -1.61
CD47-201ENST00000355354 SPATA19Q7Z5L4 167 aa5□□□□□ -1.61
CD47-201ENST00000355354 STX19Q8N4C7 294 aa5□□□□□ -1.61
CD47-201ENST00000355354 ZNF615Q8N8J6 731 aa5□□□□□ -1.61
CD47-201ENST00000355354 C11orf65Q8NCR3 313 aa5□□□□□ -1.61
CD47-201ENST00000355354 ADAD2Q8NCV1 583 aaKnown RBP5□□□□□ -1.61
CD47-201ENST00000355354 OR4D6Q8NGJ1 314 aa5□□□□□ -1.61
CD47-201ENST00000355354 GEMIN6Q8WXD5 167 aaKnown RBP5□□□□□ -1.61
CD47-201ENST00000355354 AKAP1Q92667 903 aaKnown RBP eCLIP5□□□□□ -1.61
CD47-201ENST00000355354 LIN37Q96GY3 246 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 SORCS2Q96PQ0 1159 aa5□□□□□ -1.61
CD47-201ENST00000355354 NAA11Q9BSU3 229 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 DLL4Q9NR61 685 aa5□□□□□ -1.61
CD47-201ENST00000355354 PLCXD1Q9NUJ7 323 aa5□□□□□ -1.61
CD47-201ENST00000355354 PPIEQ9UNP9 301 aaKnown RBP5□□□□□ -1.61
CD47-201ENST00000355354 HSPE1-MOB4S4R3N1 261 aa5□□□□□ -1.61
CD47-201ENST00000355354 A0A1W2PQU0 124 aa5□□□□□ -1.61
CD47-201ENST00000355354 ZNF701M0R085 212 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 SLC9A3R1O14745 358 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 APOA4P06727 396 aa5□□□□□ -1.61
CD47-201ENST00000355354 POU3F4P49335 361 aa5□□□□□ -1.61
CD47-201ENST00000355354 PRB3Q04118 309 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 HAGHQ16775 308 aa5□□□□□ -1.61
CD47-201ENST00000355354 GSG1Q2KHT4 349 aa5□□□□□ -1.61
CD47-201ENST00000355354 CHMP1BQ7LBR1 199 aa5□□□□□ -1.61
CD47-201ENST00000355354 MRGPREQ86SM8 312 aa5□□□□□ -1.61
CD47-201ENST00000355354 TGIF2LYQ8IUE0 185 aa5□□□□□ -1.61
CD47-201ENST00000355354 MUC20Q8N307 709 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 OR4C6Q8NH72 309 aa5□□□□□ -1.61
CD47-201ENST00000355354 ACOT11Q8WXI4 607 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 TMCO6Q96DC7 493 aa5□□□□□ -1.61
CD47-201ENST00000355354 OR10A4Q9H209 315 aa5□□□□□ -1.61
CD47-201ENST00000355354 CCDC68Q9H2F9 335 aa5□□□□□ -1.61
CD47-201ENST00000355354 PLCL2Q9UPR0 1127 aa5□□□□□ -1.61
CD47-201ENST00000355354 A0A0G2JMM0 328 aa5□□□□□ -1.61
CD47-201ENST00000355354 A0A1W2PPB8 328 aa5□□□□□ -1.61
CD47-201ENST00000355354 A0A1W2PRS3 328 aa5□□□□□ -1.61
CD47-201ENST00000355354 KIR3DP1A8MWS1 328 aa5□□□□□ -1.61
CD47-201ENST00000355354 SOX15O60248 233 aa5□□□□□ -1.61
CD47-201ENST00000355354 GALR3O60755 368 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 PTP4A3O75365 173 aa5□□□□□ -1.61
CD47-201ENST00000355354 ACADMP11310 421 aa5□□□□□ -1.61
CD47-201ENST00000355354 M6PRP20645 277 aa5□□□□□ -1.61
CD47-201ENST00000355354 XKP51811 444 aa5□□□□□ -1.61
CD47-201ENST00000355354 TEKQ02763 1124 aa5□□□□□ -1.61
CD47-201ENST00000355354 KEAP1Q14145 624 aa5□□□□□ -1.61
CD47-201ENST00000355354 FZD2Q14332 565 aa5□□□□□ -1.61
CD47-201ENST00000355354 TTC23Q5W5X9 447 aa5□□□□□ -1.61
CD47-201ENST00000355354 OR2A2Q6IF42 318 aa5□□□□□ -1.61
CD47-201ENST00000355354 SLC35F2Q8IXU6 374 aa5□□□□□ -1.61
CD47-201ENST00000355354 FAM26EQ8N5C1 309 aa5□□□□□ -1.61
CD47-201ENST00000355354 SLC5A11Q8WWX8 675 aa5□□□□□ -1.61
CD47-201ENST00000355354 HSPA12BQ96MM6 686 aa5□□□□□ -1.61
CD47-201ENST00000355354 LPAR4Q99677 370 aa5□□□□□ -1.61
CD47-201ENST00000355354 MAP3K3Q99759 626 aa5□□□□□ -1.61
CD47-201ENST00000355354 GABARAPL1Q9H0R8 117 aa5□□□□□ -1.61
CD47-201ENST00000355354 RAXQ9Y2V3 346 aa5□□□□□ -1.61
CD47-201ENST00000355354 A0A1B0GV50 99 aa5□□□□□ -1.61
CD47-201ENST00000355354 TMEM235A6NFC5 223 aa5□□□□□ -1.61
CD47-201ENST00000355354 SBK2P0C263 348 aa5□□□□□ -1.61
CD47-201ENST00000355354 EPHA1P21709 976 aa5□□□□□ -1.61
CD47-201ENST00000355354 HTR2CP28335 458 aa5□□□□□ -1.61
CD47-201ENST00000355354 DGKGP49619 791 aa5□□□□□ -1.61
CD47-201ENST00000355354 CCR8P51685 355 aa5□□□□□ -1.61
CD47-201ENST00000355354 CDC20Q12834 499 aa5□□□□□ -1.61
CD47-201ENST00000355354 STK11Q15831 433 aa5□□□□□ -1.61
CD47-201ENST00000355354 PLEKHN1Q494U1 663 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 C6orf163Q5TEZ5 329 aa5□□□□□ -1.61
CD47-201ENST00000355354 LIPNQ5VXI9 398 aa5□□□□□ -1.61
CD47-201ENST00000355354 ZNF660Q6AZW8 331 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 ZNF574Q6ZN55 896 aaPredicted RBP5□□□□□ -1.61
CD47-201ENST00000355354 NOXA1Q86UR1 476 aa5□□□□□ -1.61
CD47-201ENST00000355354 METTL23Q86XA0 190 aa5□□□□□ -1.61
CD47-201ENST00000355354 SLITRK4Q8IW52 837 aa5□□□□□ -1.61
CD47-201ENST00000355354 TMIEQ8NEW7 156 aa5□□□□□ -1.61
CD47-201ENST00000355354 NUDT4Q9NZJ9 180 aa5□□□□□ -1.61
CD47-201ENST00000355354 PRODH2Q9UF12 536 aa5□□□□□ -1.61
CD47-201ENST00000355354 GNPTGQ9UJJ9 305 aa5□□□□□ -1.61
CD47-201ENST00000355354 ENTPD2Q9Y5L3 495 aa5□□□□□ -1.61
CD47-201ENST00000355354 RNF222A6NCQ9 220 aa4.99□□□□□ -1.61
CD47-201ENST00000355354 KDM1AO60341 852 aa4.99□□□□□ -1.61
CD47-201ENST00000355354 UBXN7O94888 489 aa4.99□□□□□ -1.61
CD47-201ENST00000355354 CD3DP04234 171 aa4.99□□□□□ -1.61
CD47-201ENST00000355354 APODP05090 189 aa4.99□□□□□ -1.61
CD47-201ENST00000355354 OSMP13725 252 aa4.99□□□□□ -1.61
CD47-201ENST00000355354 HOXB2P14652 356 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms