RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TPK1Q9H3S4 243 aa13.67□□□□□ -0.22
PDGFA-201ENST00000354513 CACYBPQ9HB71 228 aaKnown RBP13.67□□□□□ -0.22
PDGFA-201ENST00000354513 RPS6KB2Q9UBS0 482 aa13.67□□□□□ -0.22
PDGFA-201ENST00000354513 TESQ9UGI8 421 aaKnown RBP13.67□□□□□ -0.22
PDGFA-201ENST00000354513 TRIM33Q9UPN9 1127 aa13.67□□□□□ -0.22
PDGFA-201ENST00000354513 USP22Q9UPT9 525 aa13.67□□□□□ -0.22
PDGFA-201ENST00000354513 TANC2Q9HCD6 1990 aa13.67□□□□□ -0.22
PDGFA-201ENST00000354513 SH3PXD2BA1X283 911 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 ZNF35P13682 527 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 NR4A1P22736 598 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 STX1BP61266 288 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 CDK6Q00534 326 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 POU3F1Q03052 451 aaPredicted RBP13.66□□□□□ -0.22
PDGFA-201ENST00000354513 C1DQ13901 141 aaKnown RBP13.66□□□□□ -0.22
PDGFA-201ENST00000354513 DAG1Q14118 895 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 MFSD13AQ14CX5 517 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 OR1Q1Q15612 314 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 REEP3Q6NUK4 255 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 ULK3Q6PHR2 472 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 PIGWQ7Z7B1 504 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 UEVLDQ8IX04 471 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 FGFBP3Q8TAT2 258 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 DNAJA4Q8WW22 397 aaPredicted RBP13.66□□□□□ -0.22
PDGFA-201ENST00000354513 SNX18Q96RF0 628 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 MYEF2Q9P2K5 600 aaKnown RBP13.66□□□□□ -0.22
PDGFA-201ENST00000354513 NBEAL1Q6ZS30 2694 aa13.66□□□□□ -0.22
PDGFA-201ENST00000354513 C5orf58C9J3I9 102 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 LYPD3O95274 346 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 ADRA2AP08913 450 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 B4GALT1P15291 398 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 APEX1P27695 318 aaKnown RBP13.65□□□□□ -0.22
PDGFA-201ENST00000354513 CHN2P52757 468 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 CDH12P55289 794 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 CDH15P55291 814 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 NPTX1Q15818 432 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 FXNQ16595 210 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 ELFN2Q5R3F8 820 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 METTL21CQ5VZV1 264 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 WDR88Q6ZMY6 472 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 NET1Q7Z628 596 aaPredicted RBP13.65□□□□□ -0.22
PDGFA-201ENST00000354513 TSPYL5Q86VY4 417 aaPredicted RBP13.65□□□□□ -0.22
PDGFA-201ENST00000354513 LRP11Q86VZ4 500 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 CARM1Q86X55 608 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 ZNF584Q8IVC4 421 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 SCAIQ8N9R8 606 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 ZNF540Q8NDQ6 660 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 UBASH3BQ8TF42 649 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 MRPL24Q96A35 216 aaKnown RBP13.65□□□□□ -0.22
PDGFA-201ENST00000354513 SPDL1Q96EA4 605 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 SLC47A1Q96FL8 570 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 ANKRD27Q96NW4 1050 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 CPPED1Q9BRF8 314 aaPredicted RBP13.65□□□□□ -0.22
PDGFA-201ENST00000354513 TMEM38AQ9H6F2 299 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 MRPL39Q9NYK5 338 aaKnown RBP13.65□□□□□ -0.22
PDGFA-201ENST00000354513 TENM1Q9UKZ4 2725 aa13.65□□□□□ -0.22
PDGFA-201ENST00000354513 AKAP8O43823 692 aaKnown RBP13.64□□□□□ -0.23
PDGFA-201ENST00000354513 THY1P04216 161 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 GPX2P18283 190 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 HNF1AP20823 631 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 AQP1P29972 269 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 CAPZA2P47755 286 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 ATP4BP51164 291 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 RGS8P57771 180 aaPredicted RBP13.64□□□□□ -0.23
PDGFA-201ENST00000354513 IL1RL1Q01638 556 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 PIGFQ07326 219 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 CAMK2DQ13557 499 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 SCARB2Q14108 478 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 SQLEQ14534 574 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 GSG1Q2KHT4 349 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 GKAP1Q5VSY0 366 aaPredicted RBP13.64□□□□□ -0.23
PDGFA-201ENST00000354513 LINC00114Q6XXX2 140 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 ZNF813Q6ZN06 617 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 PTOV1Q86YD1 416 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 GPR32P1Q8NGA4 272 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 HPS1Q92902 700 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 LRR1Q96L50 414 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 DYNLRB1Q9NP97 96 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 CCDC167Q9P0B6 97 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 FBXO9Q9UK97 447 aaPredicted RBP13.64□□□□□ -0.23
PDGFA-201ENST00000354513 ARL2BPQ9Y2Y0 163 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 CORINQ9Y5Q5 1042 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 M0R3H8 397 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 PLPP3O14495 311 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 NDUFAB1O14561 156 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 WNT9BO14905 357 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 NCR1O76036 304 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 MFN2O95140 757 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 HPXP02790 462 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 CD79AP11912 226 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 NQO1P15559 274 aaKnown RBP13.64□□□□□ -0.23
PDGFA-201ENST00000354513 PCBP3P57721 371 aaKnown RBP13.64□□□□□ -0.23
PDGFA-201ENST00000354513 PUDPQ08623 228 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 CCNIQ14094 377 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 MAD2L1BPQ15013 274 aaPredicted RBP13.64□□□□□ -0.23
PDGFA-201ENST00000354513 DLEU7Q6UYE1 221 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 CCDC36Q8IYA8 594 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 LINC01356Q8N9X3 169 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 IL17RDQ8NFM7 739 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 OR4D11Q8NGI4 311 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 BCAS4Q8TDM0 211 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms