RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ZNF705BP0CI00 300 aaPredicted RBP11.14□□□□□ -0.63
SMAD9-201ENST00000350148 MTNR1BP49286 362 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 RPL27P61353 136 aaKnown RBP11.14□□□□□ -0.63
SMAD9-201ENST00000350148 SYT14P1Q58G82 188 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 NDUFAF7Q7L592 441 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 OVCH1Q7RTY7 1134 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 OR5T2Q8NGG2 359 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 NKD1Q969G9 470 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 TTTY10Q9BZA0 68 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 CST11Q9H112 138 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 A4GNTQ9UNA3 340 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF705GA8MUZ8 300 aaPredicted RBP11.14□□□□□ -0.63
SMAD9-201ENST00000350148 INMT-MINDY4F8WBC2 141 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 LINC01387J3KSC0 135 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 M0R129 80 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 PAHP00439 452 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 DNASE1P24855 282 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 G0S2P27469 103 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 TGFBR3Q03167 851 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 CRMP1Q14194 572 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 TMEM176BQ3YBM2 270 aaPredicted RBP11.14□□□□□ -0.63
SMAD9-201ENST00000350148 C12orf45Q8N5I9 185 aaPredicted RBP11.14□□□□□ -0.63
SMAD9-201ENST00000350148 OR4F15Q8NGB8 312 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 OR6Q1Q8NGQ2 317 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 KCNE4Q8WWG9 221 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 ZBTB8AQ96BR9 441 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF471Q9BX82 626 aaPredicted RBP11.14□□□□□ -0.63
SMAD9-201ENST00000350148 TWSG1Q9GZX9 223 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 OR10A2Q9H208 303 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 CDCP1Q9H5V8 836 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 KLF15Q9UIH9 416 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 ANKRD12Q6UB98 2062 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 TMEM127O75204 238 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 PTHP01270 115 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 BMP4P12644 408 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 MAP2K3P46734 347 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 UBE2NP61088 152 aaKnown RBP11.14□□□□□ -0.63
SMAD9-201ENST00000350148 COL28A1Q2UY09 1125 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 PMS2CLQ68D20 193 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 Q8N402 240 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 ZFP41Q8N8Y5 198 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 RASD1Q9Y272 281 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 NAP1L6A6NFF2 107 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 ANKUB1A6NFN9 424 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 GRPRP30550 384 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 SOX3P41225 446 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 MECP2P51608 486 aaKnown RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 CHAF1BQ13112 559 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 SMUG1Q53HV7 270 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 LAIR1Q6GTX8 287 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 GUSBP11Q6P575 273 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 TMPPEQ6ZT21 453 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 DNASE2BQ8WZ79 361 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 RBM24Q9BX46 236 aaKnown RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 CHRNA10Q9GZZ6 450 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 FGF20Q9NP95 211 aaPredicted RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 PIP5K1CO60331 668 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 SULT1C4O75897 302 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 BCKDHBP21953 392 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 TUBG1P23258 451 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 PRAMEF17Q5VTA0 474 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 TMPRSS11FQ6ZWK6 438 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 NOXA1Q86UR1 476 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 NXF5Q9H1B4 397 aaKnown RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 TMEM184BQ9Y519 407 aaPredicted RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 TRPM6Q9BX84 2022 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 LINC00271P0C7V0 271 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 PEBP1P30086 187 aaKnown RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 ACTBP60709 375 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 ACTG1P63261 375 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 SIRPAP78324 504 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 IL10RAQ13651 578 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 NKG7Q16617 165 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 MEX3DQ86XN8 651 aaKnown RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 C1orf198Q9H425 327 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 CCDC86Q9H6F5 360 aaKnown RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 CHST11Q9NPF2 352 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 KCNG2Q9UJ96 466 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 FNDC1Q4ZHG4 1894 aaPredicted RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 TANC1Q9C0D5 1861 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 FAM183AA6NL82 134 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 ENPP1P22413 925 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 C12orf73Q69YU5 71 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 TMEM179BQ7Z7N9 219 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 CELF2-AS1Q8N7Q2 184 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 AMER3Q8N944 861 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 OR51L1Q8NGJ5 315 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 THAP6Q8TBB0 222 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 LIN37Q96GY3 246 aaPredicted RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 POTEKPQ9BYX7 375 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 MMP28Q9H239 520 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF160Q9HCG1 818 aa11.13□□□□□ -0.63
SMAD9-201ENST00000350148 GPR55Q9Y2T6 319 aaPredicted RBP11.13□□□□□ -0.63
SMAD9-201ENST00000350148 CELA2BP08218 269 aaPredicted RBP11.12□□□□□ -0.63
SMAD9-201ENST00000350148 SDHAP31040 664 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 SLC35D2Q76EJ3 337 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 PFN4Q8NHR9 129 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 TMEM41AQ96HV5 264 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 NUDT22Q9BRQ3 303 aa11.12□□□□□ -0.63
SMAD9-201ENST00000350148 ULBP2Q9BZM5 246 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms