RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 CD300LGQ6UXG3 332 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 Q6ZTK2 550 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 STPG2Q8N412 459 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF768Q9H5H4 540 aaKnown RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CCL27Q9Y4X3 112 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 HEPACAM2A8MVW5 462 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 BCL2L11O43521 198 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TGM5O43548 720 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SELENOFO60613 162 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 GPR75O95800 540 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CD14P08571 375 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 MAKP20794 623 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 PSMB6P28072 239 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CALCRP30988 508 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 POU3F4P49335 361 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 RAE1P78406 368 aaKnown RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 C5orf46Q6UWT4 87 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 IL34Q6ZMJ4 242 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 STAC2Q6ZMT1 411 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 NAA40Q86UY6 237 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM202A6NGA9 273 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 LGALS8O00214 317 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TACR3P29371 465 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 F2RL1P55085 397 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 WNT3P56703 355 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 METRNLQ641Q3 311 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 GATSQ8NAP1 163 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 OR11H7Q8NGC8 314 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 LDAHQ9H6V9 325 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 METTL7AQ9H8H3 244 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 FBRSQ9HAH7 460 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ELOVL3Q9HB03 270 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 EHFQ9NZC4 300 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 C19orf25Q9UFG5 118 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ELF5Q9UKW6 265 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 GPR55Q9Y2T6 319 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 NPIPA2E9PIF3 369 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 NPIPA3F8WFD2 350 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TRIM77I1YAP6 450 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 YKT6O15498 198 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 LIPCP11150 499 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 BSGP35613 385 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SLC26A5P58743 744 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 EBPQ15125 230 aaKnown RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF362Q5T0B9 420 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF626Q68DY1 528 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF836Q6ZNA1 936 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SLC38A6Q8IZM9 456 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZFP82Q8N141 532 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 PDCD1LG2Q9BQ51 273 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SEC11CQ9BY50 192 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TSPAN10Q9H1Z9 355 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM30AQ9NV96 361 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CA5BQ9Y2D0 317 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 RPH3AQ9Y2J0 694 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 FOSL2P15408 326 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CSRP3P50461 194 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 UBE2IP63279 158 aaKnown RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CSNK1G2P78368 415 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TIAL1Q01085 375 aaKnown RBP eCLIP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CDK5R1Q15078 307 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 FIGLAQ6QHK4 219 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 OPN5Q6U736 354 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 OR6N1Q8NGY5 312 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 KCNG3Q8TAE7 436 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CCNL2Q96S94 520 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SDF2Q99470 211 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 OR8D2Q9GZM6 311 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ACKR4Q9NPB9 350 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 HINT3Q9NQE9 182 aaKnown RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 DVL2O14641 736 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF264O43296 627 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 B4GALT3O60512 393 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 OR2C1O95371 312 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 B3GALT4O96024 378 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 FABP1P07148 127 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 VASPP50552 380 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 LGALSLQ3ZCW2 172 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 HIST2H3PS2Q5TEC6 136 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 VASNQ6EMK4 673 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TEX19Q8NA77 164 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF740Q8NDX6 193 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM59Q9BXS4 323 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 PIKFYVEQ9Y2I7 2098 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SMCO3A2RU48 225 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CPED1A4D0V7 1026 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 MAN2B1O00754 1011 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TGOLN2O43493 480 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CHRM2P08172 466 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 IGFBP1P08833 259 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CSF2RAP15509 400 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CXCL3P19876 107 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 PSMB5P28074 263 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 THBS2P35442 1172 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ALDH3B1P43353 468 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 CX3CR1P49238 355 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 IRF3Q14653 427 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 HLXQ14774 488 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 BHLHA9Q7RTU4 235 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF595Q8IYB9 648 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms