RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 MRPL24Q96A35 216 aaKnown RBP11.28□□□□□ -0.6
NECTIN1-203ENST00000341398 SLC41A3Q96GZ6 507 aa11.28□□□□□ -0.6
NECTIN1-203ENST00000341398 SNX18Q96RF0 628 aa11.28□□□□□ -0.6
NECTIN1-203ENST00000341398 ULBP2Q9BZM5 246 aa11.28□□□□□ -0.6
NECTIN1-203ENST00000341398 TMEM38AQ9H6F2 299 aa11.28□□□□□ -0.6
NECTIN1-203ENST00000341398 MRPL39Q9NYK5 338 aaKnown RBP11.28□□□□□ -0.6
NECTIN1-203ENST00000341398 CCDC167Q9P0B6 97 aa11.28□□□□□ -0.6
NECTIN1-203ENST00000341398 IGKV1D-42A0A075B6H8 117 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 ERLIN1O75477 346 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 SEC14L2O76054 403 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 UBL3O95164 117 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 MT-ATP6P00846 226 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 BGLAPP02818 100 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 HLA-DOBP13765 273 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 PTDSS1P48651 473 aaKnown RBP11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 SELENOVP59797 346 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 SCGB2A2Q13296 93 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 CAMK2DQ13557 499 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 RIN1Q13671 783 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 PIWIL3Q7Z3Z3 882 aaKnown RBP11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 CDK20Q8IZL9 346 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 HIPK4Q8NE63 616 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 FOXB1Q99853 325 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 TMEM43Q9BTV4 400 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 MED29Q9NX70 200 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 SLC25A37Q9NYZ2 338 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 GPR160Q9UJ42 338 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 ANGPT4Q9Y264 503 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 GMEB1Q9Y692 573 aa11.27□□□□□ -0.61
NECTIN1-203ENST00000341398 A0A0B4J2E0 115 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 A0A1B0GX12 115 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 ZNF503-AS2A6NEH8 195 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 B4DSR2 109 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 PLPP3O14495 311 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 TPST1O60507 370 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 HPRP00739 348 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 ADORA3P0DMS8 318 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 ZNF35P13682 527 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 ZNF14P17017 642 aaPredicted RBP11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 HOXB9P17482 250 aaPredicted RBP11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 GPX2P18283 190 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 CSNK1A1P48729 337 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 DVL1P1P54792 670 aaPredicted RBP11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 AQP5P55064 265 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 CDH15P55291 814 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 GLIPR1L2Q4G1C9 344 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 PHYHD1Q5SRE7 291 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 GLCCI1Q86VQ1 547 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 OR5J2Q8NH18 312 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 LRRC8CQ8TDW0 803 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 RDH5Q92781 318 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 TXNDC15Q96J42 360 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 C7orf26Q96N11 449 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 SOX7Q9BT81 388 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 CCDC28BQ9BUN5 200 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 MRPL37Q9BZE1 423 aaKnown RBP11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 TPK1Q9H3S4 243 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 RABEP2Q9H5N1 569 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 TMBIM4Q9HC24 238 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 VAPAQ9P0L0 249 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 METRNQ9UJH8 293 aa11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 ZNF346Q9UL40 294 aaKnown RBP11.26□□□□□ -0.61
NECTIN1-203ENST00000341398 SLC22A23A1A5C7 686 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 FMO6PO60774 539 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 SERPINI2O75830 405 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 FARS2O95363 451 aaKnown RBP11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 PTHP01270 115 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 HIST1H2ABP04908 130 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 B4GALT1P15291 398 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 ACHEP22303 614 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 GPR6P46095 362 aaPredicted RBP11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 GIPRP48546 466 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 CDH12P55289 794 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 TMEM33P57088 247 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 AGKQ53H12 422 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 ZNF613Q6PF04 617 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 HIST3H2AQ7L7L0 130 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 FUNDC1Q8IVP5 155 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 HIST1H2ACQ93077 130 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 TLCD1Q96CP7 247 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 MCHR1Q99705 422 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 SLAMF8Q9P0V8 285 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 SLC7A8Q9UHI5 535 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 DUSP13Q9UII6 198 aa11.25□□□□□ -0.61
NECTIN1-203ENST00000341398 C11orf98E9PRG8 122 aa11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 LYNX1G3V0Z9 82 aa11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 ZNF500O60304 480 aaPredicted RBP11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 MFN2O95140 757 aa11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 SERPINA5P05154 406 aa11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 OR8G3PP0DMU2 310 aa11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 LYNX1P0DP58 116 aa11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 AQP1P29972 269 aa11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 IL2RGP31785 369 aa11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 IDH3AP50213 366 aa11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 BIDP55957 195 aa11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 SRSF2Q01130 221 aaKnown RBP11.24□□□□□ -0.61
NECTIN1-203ENST00000341398 RBBP4Q09028 425 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms