RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 GRK6P43250 576 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 KCNJ5P48544 419 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 PRR5P85299 388 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 MGAT2Q10469 447 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 C3orf38Q5JPI3 329 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 ARHGAP40Q5TG30 622 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 RNLSQ5VYX0 342 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 OR4F15Q8NGB8 312 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 RFT1Q96AA3 541 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 OR2M2Q96R28 347 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 MNTQ99583 582 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 ARL6Q9H0F7 186 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 PNO1Q9NRX1 252 aaKnown RBP13.77□□□□□ -0.21
BRAT1-201ENST00000340611 OR10H1Q9Y4A9 318 aa13.77□□□□□ -0.21
BRAT1-201ENST00000340611 CFAP47Q6ZTR5 3102 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 A0A1B0GVI7 797 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 ZIC2O95409 532 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-201ENST00000340611 IGHV2-70P01814 119 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 BTCP35070 178 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 RFC3P40938 356 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 DUSP5Q16690 384 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 FAM199XQ6PEV8 388 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-201ENST00000340611 LDLRAD3Q86YD5 345 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 SLITRK4Q8IW52 837 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 RHOVQ96L33 236 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 EDEM2Q9BV94 578 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 JAM3Q9BX67 310 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 COL25A1Q9BXS0 654 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-201ENST00000340611 CACNG6Q9BXT2 260 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 SEMA5BQ9P283 1151 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 FLVCR2Q9UPI3 526 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 IGHV3-20A0A0C4DH32 117 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 CENPVL1A0A0U1RR11 272 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 TUBAL3A6NHL2 446 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 C4orf47A7E2U8 309 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 PRR23D1E9PI22 279 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-201ENST00000340611 IFNA4P05014 189 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 CD3GP09693 182 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 PRR23D2P0DMB1 279 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-201ENST00000340611 CD59P13987 128 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 ZNF28P17035 718 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 MTNR1AP48039 350 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 P2RY4P51582 365 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 OC90Q02509 493 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-201ENST00000340611 KLHL26Q53HC5 615 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 IDNKQ5T6J7 187 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 HSD17B13Q7Z5P4 300 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-201ENST00000340611 SUMF1Q8NBK3 374 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 OR4N2Q8NGD1 307 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 OR52R1Q8NGF1 315 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 GLYATL2Q8WU03 294 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 RBM18Q96H35 190 aaKnown RBP13.76□□□□□ -0.21
BRAT1-201ENST00000340611 CHMP1AQ9HD42 196 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-201ENST00000340611 LANCL2Q9NS86 450 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 KCNK7Q9Y2U2 307 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 LOC400499M0QZD8 3231 aa13.76□□□□□ -0.21
BRAT1-201ENST00000340611 GVINP1Q7Z2Y8 2422 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 GABRPO00591 440 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 FRS3O43559 492 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 SCRG1O75711 98 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 IGF2P01344 180 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 SULT1A3P0DMM9 295 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 SULT1A4P0DMN0 295 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 ACP2P11117 423 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 PTBP1P26599 531 aaKnown RBP eCLIP13.75□□□□□ -0.21
BRAT1-201ENST00000340611 HLXQ14774 488 aaPredicted RBP13.75□□□□□ -0.21
BRAT1-201ENST00000340611 GUCA2BQ16661 112 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 MFSD12Q6NUT3 480 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 LRRN1Q6UXK5 716 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 ART5Q96L15 291 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 PARD6AQ9NPB6 346 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 MRPL15Q9P015 296 aaKnown RBP13.75□□□□□ -0.21
BRAT1-201ENST00000340611 A4GNTQ9UNA3 340 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 CEP250Q9BV73 2442 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 MT-ND4P03905 459 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 ATP1B1P05026 303 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 SMIM6P0DI80 62 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 TCF15Q12870 199 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 OR2B11Q5JQS5 317 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 FHL5Q5TD97 284 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 FIGNL1Q6PIW4 674 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 LANCL3Q6ZV70 420 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 SERPINA12Q8IW75 414 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 PUSL1Q8N0Z8 303 aaKnown RBP13.75□□□□□ -0.21
BRAT1-201ENST00000340611 OR2L13Q8N349 312 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 OR14A16Q8NHC5 309 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 SCARB1Q8WTV0 552 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 FNDC11Q9BVV2 318 aa13.75□□□□□ -0.21
BRAT1-201ENST00000340611 GXYLT2A0PJZ3 443 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 WRBO00258 174 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 NDUFB7P17568 137 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 FBLP22087 321 aaKnown RBP13.74□□□□□ -0.21
BRAT1-201ENST00000340611 FGF9P31371 208 aaPredicted RBP13.74□□□□□ -0.21
BRAT1-201ENST00000340611 OR56A1Q8NGH5 318 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 ADAMTS15Q8TE58 950 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 OTULINQ96BN8 352 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 ARHGAP9Q9BRR9 750 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 ING1Q9UK53 422 aaPredicted RBP13.74□□□□□ -0.21
BRAT1-201ENST00000340611 TRDV1A0A1B0GX56 115 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 A0A1B0GX78 115 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms