RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PSMF1Q92530 271 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 HDAC2Q92769 488 aaKnown RBP11.68□□□□□ -0.54
LIN54-201ENST00000340417 ZNF583Q96ND8 569 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 RASL10BQ96S79 203 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 COA3Q9Y2R0 106 aaPredicted RBP11.68□□□□□ -0.54
LIN54-201ENST00000340417 SLC1A7O00341 560 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 UCHL1P09936 223 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 FBXO45P0C2W1 286 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 ANKRD34CP0C6C1 535 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 KCNJ8Q15842 424 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 LTC4SQ16873 150 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 RASD2Q96D21 266 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 PHOX2BQ99453 314 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 TP63Q9H3D4 680 aaPredicted RBP11.68□□□□□ -0.54
LIN54-201ENST00000340417 KCNN3Q9UGI6 736 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 B3GALT5Q9Y2C3 310 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 MED16Q9Y2X0 877 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 A0A1W2PQM1 296 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 SP1P08047 785 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 FABP6P51161 128 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 OR6V1Q8N148 313 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 NUBPLQ8TB37 319 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 ACER3Q9NUN7 267 aa11.68□□□□□ -0.54
LIN54-201ENST00000340417 ANXA3P12429 323 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 NDUFB7P17568 137 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 VAMP1P23763 118 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 GRB2P62993 217 aaKnown RBP11.67□□□□□ -0.54
LIN54-201ENST00000340417 FZD5Q13467 585 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 ARL6IP1Q15041 203 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 TSPYL5Q86VY4 417 aaPredicted RBP11.67□□□□□ -0.54
LIN54-201ENST00000340417 TOMM5Q8N4H5 51 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 TMEM163Q8TC26 289 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 MMP25Q9NPA2 562 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 METTL15A6NJ78 407 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 EDDM3BP56851 147 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 TMEM108Q6UXF1 575 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 STEAP2Q8NFT2 490 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 CD3EP07766 207 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 ROR2Q01974 943 aaKnown RBP11.67□□□□□ -0.54
LIN54-201ENST00000340417 EIF4EBP2Q13542 120 aaPredicted RBP11.67□□□□□ -0.54
LIN54-201ENST00000340417 POU4F3Q15319 338 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 SNRNP27Q8WVK2 155 aaKnown RBP11.67□□□□□ -0.54
LIN54-201ENST00000340417 ARSGQ96EG1 525 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 ANKRD19PQ9H560 264 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 FOXJ2Q9P0K8 574 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 A0A087WUU8 490 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 PVALBP20472 110 aaPredicted RBP11.67□□□□□ -0.54
LIN54-201ENST00000340417 MTCP1P56278 107 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 GPR50Q13585 617 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 KRTCAP3Q53RY4 240 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 DCSTAMPQ9H295 470 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 NIPAL2Q9H841 368 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 ZNF346Q9UL40 294 aaKnown RBP11.67□□□□□ -0.54
LIN54-201ENST00000340417 A0A0X1KG70 313 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 LGI1O95970 557 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 SLC25A44Q96H78 314 aaPredicted RBP11.67□□□□□ -0.54
LIN54-201ENST00000340417 HSPE1-MOB4S4R3N1 261 aa11.67□□□□□ -0.54
LIN54-201ENST00000340417 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 SLC22A23A1A5C7 686 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 WBP4O75554 376 aaKnown RBP11.66□□□□□ -0.54
LIN54-201ENST00000340417 ACTL6AO96019 429 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 MAP2K6P52564 334 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 KHDC1LQ5JSQ8 128 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 TMEM69Q5SWH9 247 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 VWCEQ96DN2 955 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 GIMAP5Q96F15 307 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 MED20Q9H944 212 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 WDR76Q9H967 626 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 EMC7Q9NPA0 242 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 UFSP2Q9NUQ7 469 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 SCP2D1Q9UJQ7 156 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 SERPINA2P20848 420 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 IL2RGP31785 369 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 DCTN2Q13561 401 aaKnown RBP11.66□□□□□ -0.54
LIN54-201ENST00000340417 THEM4Q5T1C6 240 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 NLRC3Q7RTR2 1065 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 STK35Q8TDR2 534 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 RTL8AQ9BWD3 113 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 TMEM72A0PK05 275 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 B4DXG7 233 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 SLC22A1O15245 554 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 HNRNPA0Q13151 305 aaKnown RBP11.66□□□□□ -0.54
LIN54-201ENST00000340417 RGS21Q2M5E4 152 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 SLC22A6Q4U2R8 563 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 C6orf141Q5SZD1 244 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 TMED4Q7Z7H5 227 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 OR10D3Q8NH80 312 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 TEX37Q96LM6 180 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 SARGQ9BW04 601 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 RAB33BQ9H082 229 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 CPNE5Q9HCH3 593 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 GHRLQ9UBU3 117 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 B3GNT3Q9Y2A9 372 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 SESN1Q9Y6P5 492 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 AGAP5A6NIR3 686 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 GPX2P18283 190 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 DIO1P49895 249 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 MCCD1P59942 119 aaPredicted RBP11.66□□□□□ -0.54
LIN54-201ENST00000340417 PRICKLE4Q2TBC4 344 aa11.66□□□□□ -0.54
LIN54-201ENST00000340417 ALKBH6Q3KRA9 238 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms