RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 UGT2A3Q6UWM9 527 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 NHLRC1Q6VVB1 395 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 CXXC5Q7LFL8 322 aaKnown RBP12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 ADGRE4PQ86SQ3 457 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF786Q8N393 782 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 NPEPL1Q8NDH3 523 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 OR4K13Q8NH42 304 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 OR6X1Q8NH79 312 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 CNIH3Q8TBE1 160 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 FNDC9Q8TBE3 224 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 APH1BQ8WW43 257 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 UBE2FQ969M7 185 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF566Q969W8 418 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 SNRNP40Q96DI7 357 aaKnown RBP12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 CNTNAP3BQ96NU0 1288 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 CNTNAP3Q9BZ76 1288 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 PRRG4Q9BZD6 226 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 RNF122Q9H9V4 155 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 RCE1Q9Y256 329 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 GPR52Q9Y2T5 361 aa12.96□□□□□ -0.34
NIPAL3-202ENST00000339255 PRSS37A4D1T9 235 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 FIGNL2A6NMB9 653 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF716A6NP11 495 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 KDM4EB2RXH2 506 aaPredicted RBP12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 PRODHO43272 600 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 WDR1O75083 606 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC2A10O95528 541 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 IGHG1P01857 330 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 GABRA1P14867 456 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 KLK2P20151 261 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 RASGEF1BQ0VAM2 473 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 EEF1A1P5Q5VTE0 462 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 CREB3L2Q70SY1 520 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 CPOQ8IVL8 374 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC37A3Q8NCC5 494 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 SDR9C7Q8NEX9 313 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 FNDC8Q8TC99 324 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 ROBO4Q8WZ75 1007 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC25A44Q96H78 314 aaPredicted RBP12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 NMNAT3Q96T66 252 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 HINT3Q9NQE9 182 aaKnown RBP12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 GLRX2Q9NS18 164 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 KLHL13Q9P2N7 655 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 CLCF1Q9UBD9 225 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 MYRFQ9Y2G1 1151 aa12.95□□□□□ -0.34
NIPAL3-202ENST00000339255 COL6A6A6NMZ7 2263 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF726A6NNF4 738 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 TTLL8A6PVC2 850 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF724A8MTY0 619 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 HOXD4P09016 255 aaPredicted RBP12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC25A1P53007 311 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 BIDP55957 195 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 LGALS3BPQ08380 585 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 KCTD21Q4G0X4 260 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 PLBD1Q6P4A8 553 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 LEG1Q6P5S2 330 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 MCEMP1Q8IX19 187 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 OR2T4Q8NH00 348 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 ABHD3Q8WU67 409 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF582Q96NG8 517 aaPredicted RBP12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 KCNK17Q96T54 332 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 ALG12Q9BV10 488 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 NMNAT2Q9BZQ4 307 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 CALHM2Q9HA72 323 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 BCO1Q9HAY6 547 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 PLCXD1Q9NUJ7 323 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 MED29Q9NX70 200 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 SCN3BQ9NY72 215 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 DNAJC27Q9NZQ0 273 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 VSX1Q9NZR4 365 aaPredicted RBP12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 H2AFY2Q9P0M6 372 aaPredicted RBP12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 PCDHGB5Q9Y5G0 923 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 FLVCR1Q9Y5Y0 555 aa12.94□□□□□ -0.34
NIPAL3-202ENST00000339255 CD8B2A6NJW9 211 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC22A31A6NKX4 558 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC1A7O00341 560 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 ARHGEF9O43307 516 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 ENTPD6O75354 484 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 WISP2O76076 250 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 ABOP16442 354 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 CDKN2AP42771 156 aaKnown RBP12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 CLDN17P56750 224 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 RBPJQ06330 500 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 TMED1Q13445 227 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 LY6DQ14210 128 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 AADACL4Q5VUY2 407 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 NIPAL3Q6P499 406 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 CYB561A3Q8NBI2 242 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 TMEM45BQ96B21 275 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 DDOQ99489 341 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 ASF1BQ9NVP2 202 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 TPRKBQ9Y3C4 175 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 RPL36Q9Y3U8 105 aaKnown RBP12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 SHANK1Q9Y566 2161 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 IRGMA1A4Y4 181 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 OR6C68A6NDL8 312 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 FAM183AA6NL82 134 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 AQP8O94778 261 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 EDN3P14138 238 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms