RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 RANBP3LQ86VV4 465 aaPredicted RBP11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 LRP11Q86VZ4 500 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 ADPRHL1Q8NDY3 354 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 OR6N1Q8NGY5 312 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 OR6S1Q8NH40 331 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 PROX1Q92786 737 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 SOX7Q9BT81 388 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 TMEM43Q9BTV4 400 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 PLK3Q9H4B4 646 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 RABEP2Q9H5N1 569 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 NANOGQ9H9S0 305 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF224Q9NZL3 707 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 GMPR2Q9P2T1 348 aaKnown RBP11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 CORO2BQ9UQ03 480 aa11.56□□□□□ -0.56
NUDCD3-201ENST00000338427 COL6A5A8TX70 2615 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 LRP5LA4QPB2 252 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 B4GALT1P15291 398 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 H2AFXP16104 143 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF16P17020 682 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 TCN1P20061 433 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 NPR2P20594 1047 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 FUT4P22083 530 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 ARR3P36575 388 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 NR4A2P43354 598 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 SH3BGRP55822 239 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 PUDPQ08623 228 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 RBBP4Q09028 425 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 CHRFAM7AQ494W8 412 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 C1QTNF12Q5T7M4 302 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 LRFN4Q6PJG9 635 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 PXKQ7Z7A4 578 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 SKA3Q8IX90 412 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 CDK20Q8IZL9 346 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 FAM169BQ8N8A8 192 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 ANKK1Q8NFD2 765 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 OR4F15Q8NGB8 312 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 OR5J2Q8NH18 312 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 ADAMTS16Q8TE57 1224 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 EPYCQ99645 322 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 PRSS27Q9BQR3 290 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 TMEM120AQ9BXJ8 343 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 SLC7A7Q9UM01 511 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 FZR1Q9UM11 496 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 CORINQ9Y5Q5 1042 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 ATRQ13535 2644 aa11.55□□□□□ -0.56
NUDCD3-201ENST00000338427 LOC100653049A0A140TA62 436 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 CHP2O43745 196 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 KRT34O76011 436 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 STAMBPO95630 424 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 ADRA2AP08913 450 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 GIPRP48546 466 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 PTDSS1P48651 473 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 SEC24CP53992 1094 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 RAB1AP62820 205 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 RUNX1T1Q06455 604 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 DAG1Q14118 895 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 RAB39AQ14964 217 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 EFNB3Q15768 340 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF74Q16587 644 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 C3orf36Q3SXR2 165 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 IQCCQ4KMZ1 466 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 CGB2Q6NT52 195 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF613Q6PF04 617 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 TTC33Q6PID6 262 aaPredicted RBP11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 SLC35D2Q76EJ3 337 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 NKAIN4Q8IVV8 208 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 SCAIQ8N9R8 606 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 NUP37Q8NFH4 326 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 BHLHE22Q8NFJ8 381 aaPredicted RBP11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 SLC26A7Q8TE54 656 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 TMEM54Q969K7 222 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 MSI2Q96DH6 328 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 LRR1Q96L50 414 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 ULBP2Q9BZM5 246 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 TPK1Q9H3S4 243 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 MEPEQ9NQ76 525 aaPredicted RBP11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 NOX1Q9Y5S8 564 aa11.54□□□□□ -0.56
NUDCD3-201ENST00000338427 LMX1BO60663 402 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 FMO6PO60774 539 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 OR6A2O95222 327 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 C8BP07358 591 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 CCL2P13500 99 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF35P13682 527 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF14P17017 642 aaPredicted RBP11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 NR4A1P22736 598 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 IL2RGP31785 369 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 PCGF2P35227 344 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 OR1E2P47887 323 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 CSNK1A1P48729 337 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 MYBPC1Q00872 1141 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 ZP4Q12836 540 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 KLF10Q13118 480 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 SNTB2Q13425 540 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 GSG1Q2KHT4 349 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 VMACQ2NL98 169 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 CARM1Q86X55 608 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 CALHM3Q86XJ0 350 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 PFN4Q8NHR9 129 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 ZNF317Q96PQ6 595 aaPredicted RBP11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 FOXB1Q99853 325 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms