RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SLC35F4A4IF30 521 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 ANGPT2O15123 496 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 TRAF3IP2O43734 574 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-202ENST00000337571 SERPINI2O75830 405 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 SEC14L2O76054 403 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 RAB36O95755 333 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 MT-ATP6P00846 226 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 HIST1H2ABP04908 130 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 ZNF23P17027 643 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 HOXB9P17482 250 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-202ENST00000337571 THBS2P35442 1172 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 ATP4BP51164 291 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 CHN2P52757 468 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 CDH12P55289 794 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 PUDPQ08623 228 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 SNTB2Q13425 540 aaKnown RBP9.23□□□□□ -0.93
CAPN3-202ENST00000337571 CAMK2DQ13557 499 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 ADRM1Q16186 407 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 CYP51A1Q16850 503 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 FAM120AOSQ5T036 256 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 GKAP1Q5VSY0 366 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-202ENST00000337571 KRT80Q6KB66 452 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 UGT2A3Q6UWM9 527 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 HIST3H2AQ7L7L0 130 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 PXKQ7Z7A4 578 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 PHC2Q8IXK0 858 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 MSRB3Q8IXL7 192 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 TMEM123Q8N131 208 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 ARIH2OSQ8N7S6 290 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 SMYD1Q8NB12 490 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 C11orf65Q8NCR3 313 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 SLC26A7Q8TE54 656 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 UBASH3BQ8TF42 649 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 CKAP2Q8WWK9 683 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 HIST1H2ACQ93077 130 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 MSI2Q96DH6 328 aaKnown RBP9.23□□□□□ -0.93
CAPN3-202ENST00000337571 SLC41A3Q96GZ6 507 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 MCHR1Q99705 422 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 TMEM43Q9BTV4 400 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 ULBP2Q9BZM5 246 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 NELFAQ9H3P2 528 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 MS4A5Q9H3V2 200 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 DENND2DQ9H6A0 471 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-202ENST00000337571 FBXL3Q9UKT7 428 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 TRIM33Q9UPN9 1127 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 NDUFAF1Q9Y375 327 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 ATRQ13535 2644 aa9.23□□□□□ -0.93
CAPN3-202ENST00000337571 IGKV1D-42A0A075B6H8 117 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 A0A0B4J2E0 115 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 IGHV4-61A0A0C4DH41 118 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 A0A1B0GX12 115 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 PLPP3O14495 311 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 FZD7O75084 574 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 ENTPD5O75356 428 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 MFN2O95140 757 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 UBL3O95164 117 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 STAMBPO95630 424 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 HPRP00739 348 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 HLA-HP01893 362 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 BGLAPP02818 100 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 C8BP07358 591 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 ADRA2AP08913 450 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 ADORA3P0DMS8 318 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 HLA-DOBP13765 273 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 IFNGR1P15260 489 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 NR4A1P22736 598 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 PTDSS1P48651 473 aaKnown RBP9.22□□□□□ -0.93
CAPN3-202ENST00000337571 RAB1AP62820 205 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 RBBP4Q09028 425 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 RUNDC3AQ59EK9 446 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 PHYHD1Q5SRE7 291 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 ZNF613Q6PF04 617 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 TTC33Q6PID6 262 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-202ENST00000337571 SLC30A8Q8IWU4 369 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 ZCCHC24Q8N2G6 241 aaKnown RBP9.22□□□□□ -0.93
CAPN3-202ENST00000337571 C10orf111Q8N326 155 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 ZNF786Q8N393 782 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 TXNDC15Q96J42 360 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 ATP6V1G3Q96LB4 118 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 MOGAT1Q96PD6 335 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 BPESC1Q9GZL8 116 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 SEC61A2Q9H9S3 476 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 NOX3Q9HBY0 568 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 INTS9Q9NV88 658 aaKnown RBP9.22□□□□□ -0.93
CAPN3-202ENST00000337571 MED29Q9NX70 200 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 B3GNT2Q9NY97 397 aa9.22□□□□□ -0.93
CAPN3-202ENST00000337571 LEF1Q9UJU2 399 aaPredicted RBP9.22□□□□□ -0.93
CAPN3-202ENST00000337571 TRBV5-3A0A0A0MS03 114 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 C11orf98E9PRG8 122 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 M0QX08 132 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 RNF13O43567 381 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 CHP2O43745 196 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 SYNGR3O43761 229 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 FMO6PO60774 539 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 SASH3O75995 380 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 GIFP27352 417 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 APEX1P27695 318 aaKnown RBP9.21□□□□□ -0.94
CAPN3-202ENST00000337571 CSNK1A1P48729 337 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 EVX1P49640 407 aa9.21□□□□□ -0.94
CAPN3-202ENST00000337571 BIDP55957 195 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms