RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 GLB1P16278 677 aa8□□□□□ -1.13
SNCA-201ENST00000336904 SRMP19623 302 aa8□□□□□ -1.13
SNCA-201ENST00000336904 SDHAP31040 664 aa8□□□□□ -1.13
SNCA-201ENST00000336904 HOXD12P35452 270 aa8□□□□□ -1.13
SNCA-201ENST00000336904 PSMD4P55036 377 aaKnown RBP8□□□□□ -1.13
SNCA-201ENST00000336904 GPLD1P80108 840 aa8□□□□□ -1.13
SNCA-201ENST00000336904 LGALS3BPQ08380 585 aa8□□□□□ -1.13
SNCA-201ENST00000336904 CDONQ4KMG0 1287 aa8□□□□□ -1.13
SNCA-201ENST00000336904 PRAMEF20Q5VT98 475 aa8□□□□□ -1.13
SNCA-201ENST00000336904 PXKQ7Z7A4 578 aa8□□□□□ -1.13
SNCA-201ENST00000336904 NSMAFQ92636 917 aa8□□□□□ -1.13
SNCA-201ENST00000336904 ITPKCQ96DU7 683 aa8□□□□□ -1.13
SNCA-201ENST00000336904 TMEM246Q9BRR3 403 aa8□□□□□ -1.13
SNCA-201ENST00000336904 LIN7BQ9HAP6 207 aa8□□□□□ -1.13
SNCA-201ENST00000336904 CYSLTR2Q9NS75 346 aa8□□□□□ -1.13
SNCA-201ENST00000336904 KLK11Q9UBX7 282 aa8□□□□□ -1.13
SNCA-201ENST00000336904 LAMA5O15230 3695 aa8□□□□□ -1.13
SNCA-201ENST00000336904 TMED7-TICAM2A0A0A6YYA0 188 aa8□□□□□ -1.13
SNCA-201ENST00000336904 LOC101059948A0A1B0GTJ6 334 aa8□□□□□ -1.13
SNCA-201ENST00000336904 FITM1A5D6W6 292 aa8□□□□□ -1.13
SNCA-201ENST00000336904 CENPXA8MT69 81 aa8□□□□□ -1.13
SNCA-201ENST00000336904 INMT-MINDY4F8WBC2 141 aa8□□□□□ -1.13
SNCA-201ENST00000336904 K7ESF4 209 aa8□□□□□ -1.13
SNCA-201ENST00000336904 SMAD9O15198 467 aaKnown RBP8□□□□□ -1.13
SNCA-201ENST00000336904 SIGLEC6O43699 453 aa8□□□□□ -1.13
SNCA-201ENST00000336904 NUDT21O43809 227 aaKnown RBP8□□□□□ -1.13
SNCA-201ENST00000336904 PPM1BO75688 479 aa8□□□□□ -1.13
SNCA-201ENST00000336904 CTLA4P16410 223 aa8□□□□□ -1.13
SNCA-201ENST00000336904 OR7A5Q15622 319 aa8□□□□□ -1.13
SNCA-201ENST00000336904 NTRK2Q16620 822 aa8□□□□□ -1.13
SNCA-201ENST00000336904 ZSWIM7Q19AV6 140 aa8□□□□□ -1.13
SNCA-201ENST00000336904 OGFOD3Q6PK18 319 aa8□□□□□ -1.13
SNCA-201ENST00000336904 TMPRSS12Q86WS5 348 aa8□□□□□ -1.13
SNCA-201ENST00000336904 LRRC28Q86X40 367 aaPredicted RBP8□□□□□ -1.13
SNCA-201ENST00000336904 ZNF676Q8N7Q3 588 aa8□□□□□ -1.13
SNCA-201ENST00000336904 LRRC75AQ8NAA5 344 aa8□□□□□ -1.13
SNCA-201ENST00000336904 FAM71CQ8NEG0 241 aa8□□□□□ -1.13
SNCA-201ENST00000336904 PCNPQ8WW12 178 aaKnown RBP8□□□□□ -1.13
SNCA-201ENST00000336904 TRIM63Q969Q1 353 aa8□□□□□ -1.13
SNCA-201ENST00000336904 CYYR1Q96J86 154 aa8□□□□□ -1.13
SNCA-201ENST00000336904 NMNAT2Q9BZQ4 307 aa8□□□□□ -1.13
SNCA-201ENST00000336904 OCIAD1Q9NX40 245 aa8□□□□□ -1.13
SNCA-201ENST00000336904 SUSD2Q9UGT4 822 aa8□□□□□ -1.13
SNCA-201ENST00000336904 TEKT2Q9UIF3 430 aa8□□□□□ -1.13
SNCA-201ENST00000336904 KLHL21Q9UJP4 597 aa8□□□□□ -1.13
SNCA-201ENST00000336904 FBXL3Q9UKT7 428 aa8□□□□□ -1.13
SNCA-201ENST00000336904 BAIAP2Q9UQB8 552 aa8□□□□□ -1.13
SNCA-201ENST00000336904 HIF3AQ9Y2N7 669 aa8□□□□□ -1.13
SNCA-201ENST00000336904 TMED7Q9Y3B3 224 aa8□□□□□ -1.13
SNCA-201ENST00000336904 SIT1Q9Y3P8 196 aa8□□□□□ -1.13
SNCA-201ENST00000336904 FAM186AA6NE01 2351 aa8□□□□□ -1.13
SNCA-201ENST00000336904 IGKV1D-43A0A0B4J1Z2 117 aa8□□□□□ -1.13
SNCA-201ENST00000336904 TRBV11-1A0A0K0K1C0 115 aa8□□□□□ -1.13
SNCA-201ENST00000336904 LMX1BO60663 402 aa8□□□□□ -1.13
SNCA-201ENST00000336904 SLC43A1O75387 559 aa8□□□□□ -1.13
SNCA-201ENST00000336904 SCRG1O75711 98 aa8□□□□□ -1.13
SNCA-201ENST00000336904 HEXBP07686 556 aa8□□□□□ -1.13
SNCA-201ENST00000336904 GP1BBP13224 206 aa8□□□□□ -1.13
SNCA-201ENST00000336904 ARSBP15848 533 aa8□□□□□ -1.13
SNCA-201ENST00000336904 ADRA2CP18825 462 aa8□□□□□ -1.13
SNCA-201ENST00000336904 UQCRC1P31930 480 aa8□□□□□ -1.13
SNCA-201ENST00000336904 BTCP35070 178 aa8□□□□□ -1.13
SNCA-201ENST00000336904 PRPS1P60891 318 aa8□□□□□ -1.13
SNCA-201ENST00000336904 RNF4P78317 190 aa8□□□□□ -1.13
SNCA-201ENST00000336904 RSPO4Q2I0M5 234 aaPredicted RBP8□□□□□ -1.13
SNCA-201ENST00000336904 TRILQ7L0X0 811 aa8□□□□□ -1.13
SNCA-201ENST00000336904 ADGRG3Q86Y34 549 aa8□□□□□ -1.13
SNCA-201ENST00000336904 GLB1L2Q8IW92 636 aa8□□□□□ -1.13
SNCA-201ENST00000336904 D2HGDHQ8N465 521 aa8□□□□□ -1.13
SNCA-201ENST00000336904 CADM4Q8NFZ8 388 aa8□□□□□ -1.13
SNCA-201ENST00000336904 OR1N1Q8NGS0 311 aa8□□□□□ -1.13
SNCA-201ENST00000336904 DAZLQ92904 295 aaKnown RBP8□□□□□ -1.13
SNCA-201ENST00000336904 JAM3Q9BX67 310 aa8□□□□□ -1.13
SNCA-201ENST00000336904 MRPS17Q9Y2R5 130 aaKnown RBP8□□□□□ -1.13
SNCA-201ENST00000336904 MN1Q10571 1320 aaPredicted RBP7.99□□□□□ -1.13
SNCA-201ENST00000336904 BOD1L1Q8NFC6 3051 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 A0A0A6YYJ9 748 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 ZNF593O00488 134 aaPredicted RBP7.99□□□□□ -1.13
SNCA-201ENST00000336904 XKRYO14609 159 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 TSPAN2O60636 221 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 SLC19A2O60779 497 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 PNPP00491 289 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 PNMTP11086 282 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 ACTA2P62736 377 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 ACTG2P63267 376 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 BDH1Q02338 343 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 MFGE8Q08431 387 aaPredicted RBP7.99□□□□□ -1.13
SNCA-201ENST00000336904 CARD17Q5XLA6 110 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 FAM205BPQ63HN1 556 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 FAM220AQ7Z4H9 259 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 PRSS35Q8N3Z0 413 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 POMGNT2Q8NAT1 580 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 TMEM106AQ96A25 262 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 CDX2Q99626 313 aaPredicted RBP7.99□□□□□ -1.13
SNCA-201ENST00000336904 PTDSS2Q9BVG9 487 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 ZMAT3Q9HA38 289 aaKnown RBP7.99□□□□□ -1.13
SNCA-201ENST00000336904 HAO2Q9NYQ3 351 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 RPH3AQ9Y2J0 694 aaPredicted RBP7.99□□□□□ -1.13
SNCA-201ENST00000336904 A0A1W2PNR3 127 aa7.99□□□□□ -1.13
SNCA-201ENST00000336904 ZNF879B4DU55 563 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms