RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 RPL4P36578 427 aaKnown RBP14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 CDH11P55287 796 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 LGALS3BPQ08380 585 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 POU4F2Q12837 409 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 C1DQ13901 141 aaKnown RBP14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 C1orf140Q5VVS0 124 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 B3GNT6Q6ZMB0 384 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 MEPCEQ7L2J0 689 aaKnown RBP14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 NANOGNBQ7Z5D8 188 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 PLCZ1Q86YW0 608 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 SCAIQ8N9R8 606 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 PROKR2Q8NFJ6 384 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 OR2M3Q8NG83 312 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 OR4K17Q8NGC6 315 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 TMIGD2Q96BF3 282 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 MND1Q9BWT6 205 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 ASPNQ9BXN1 380 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 AMBNQ9NP70 447 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 INPP5EQ9NRR6 644 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 QPCTLQ9NXS2 382 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 MED11Q9P086 117 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 PLEKHB1Q9UF11 243 aaPredicted RBP14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 EXOGQ9Y2C4 368 aaKnown RBP14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 FAM215AQ9Y5M1 114 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 TACC2O95359 2948 aa14.73□□□□□ -0.05
PDLIM1-201ENST00000329399 FZD7O75084 574 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 BGLAPP02818 100 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 CD14P08571 375 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 MYL12AP19105 171 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 UQCRC1P31930 480 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 TOMM20Q15388 145 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 TOMM34Q15785 309 aaPredicted RBP14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 SGCBQ16585 318 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 CNPY1Q3B7I2 92 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 ZNF585AQ6P3V2 769 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 THSD4Q6ZMP0 1018 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 ANKRD13BQ86YJ7 626 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 CLVS1Q8IUQ0 354 aaPredicted RBP14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 MFSD8Q8NHS3 518 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 SGCDQ92629 289 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 COG8Q96MW5 612 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 ERMAPQ96PL5 475 aaPredicted RBP14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 SNX18Q96RF0 628 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 TIMP4Q99727 224 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 EXO5Q9H790 373 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 ISYNA1Q9NPH2 558 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 PTTG2Q9NZH5 202 aa14.72□□□□□ -0.05
PDLIM1-201ENST00000329399 PKDREJQ9NTG1 2253 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 E9PLN8 166 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 M0R129 80 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 GMFGO60234 142 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 C21orf33P30042 268 aaPredicted RBP14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 DSCR4P56555 118 aaPredicted RBP14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 PIGFQ07326 219 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 ZP4Q12836 540 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 ITGADQ13349 1161 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 PLPPR5Q32ZL2 321 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 ALG10Q5BKT4 473 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 SLC35D3Q5M8T2 416 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 LCN1P1Q5VSP4 162 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 MRGPRGQ86SM5 289 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 EGFL6Q8IUX8 553 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 CPOQ8IVL8 374 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 OR5J2Q8NH18 312 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 TAAR8Q969N4 342 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 ISOC1Q96CN7 298 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 KTI12Q96EK9 354 aaPredicted RBP14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 C1GALT1C1Q96EU7 318 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 RNFT2Q96EX2 444 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 VKORC1Q9BQB6 163 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 ALKBH4Q9NXW9 302 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 MRPL39Q9NYK5 338 aaKnown RBP14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 MRPS18CQ9Y3D5 142 aaKnown RBP14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 CACNA1CQ13936 2221 aa14.71□□□□□ -0.05
PDLIM1-201ENST00000329399 ABCA12Q86UK0 2595 aa14.71□□□□□ -0.06
PDLIM1-201ENST00000329399 CSMD1Q96PZ7 3565 aa14.71□□□□□ -0.06
PDLIM1-201ENST00000329399 KIAA1549Q9HCM3 1950 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 TMEM129A0AVI4 362 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 TMEM72A0PK05 275 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 NPIPB13A6NJU9 1138 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 NPIPB4C9JG80 1138 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 CBR3O75828 277 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 GRNP28799 593 aaKnown RBP14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 CENPAP49450 140 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 STARP49675 285 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 CASP6P55212 293 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 PMPCAQ10713 525 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 VASNQ6EMK4 673 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 PLXDC2Q6UX71 529 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 SEM1Q6ZVN7 128 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 ERI1Q8IV48 349 aaKnown RBP14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 LGALS12Q96DT0 336 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 NPAS1Q99742 590 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 HINT3Q9NQE9 182 aaKnown RBP14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 B4GALT7Q9UBV7 327 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 FBN2P35556 2912 aa14.7□□□□□ -0.06
PDLIM1-201ENST00000329399 OR14I1A6ND48 311 aa14.69□□□□□ -0.06
PDLIM1-201ENST00000329399 TRIM64BA6NI03 449 aa14.69□□□□□ -0.06
PDLIM1-201ENST00000329399 BLOC1S5-TXNDC5H3BN57 136 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms