RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 IGKV1D-42A0A075B6H8 117 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 HMGB1P1B2RPK0 211 aaPredicted RBP20.14■□□□□ 0.81
TMEM54-201ENST00000329151 SYNGR3O43761 229 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 TGDSO95455 350 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 C8BP07358 591 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 B4GALT1P15291 398 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 NR4A1P22736 598 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 PTDSS1P48651 473 aaKnown RBP20.14■□□□□ 0.81
TMEM54-201ENST00000329151 CSNK1A1P48729 337 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 LRIF1Q5T3J3 769 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 BLOC1S3Q6QNY0 202 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 DENND2DQ9H6A0 471 aaPredicted RBP20.14■□□□□ 0.81
TMEM54-201ENST00000329151 MED29Q9NX70 200 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 MRPL39Q9NYK5 338 aaKnown RBP20.14■□□□□ 0.81
TMEM54-201ENST00000329151 SLC25A37Q9NYZ2 338 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 REV1Q9UBZ9 1251 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 SVEP1Q4LDE5 3571 aa20.14■□□□□ 0.81
TMEM54-201ENST00000329151 MS4A18H0YCH9 400 aa20.13■□□□□ 0.81
TMEM54-201ENST00000329151 TCF21O43680 179 aa20.13■□□□□ 0.81
TMEM54-201ENST00000329151 FZD7O75084 574 aa20.13■□□□□ 0.81
TMEM54-201ENST00000329151 SASH3O75995 380 aa20.13■□□□□ 0.81
TMEM54-201ENST00000329151 UBL3O95164 117 aa20.13■□□□□ 0.81
TMEM54-201ENST00000329151 TACSTD2P09758 323 aa20.13■□□□□ 0.81
TMEM54-201ENST00000329151 MS4A18Q3C1V0 323 aa20.13■□□□□ 0.81
TMEM54-201ENST00000329151 SWT1Q5T5J6 900 aaKnown RBP20.13■□□□□ 0.81
TMEM54-201ENST00000329151 HIPK4Q8NE63 616 aa20.13■□□□□ 0.81
TMEM54-201ENST00000329151 MRPL24Q96A35 216 aaKnown RBP20.13■□□□□ 0.81
TMEM54-201ENST00000329151 C7orf26Q96N11 449 aa20.13■□□□□ 0.81
TMEM54-201ENST00000329151 A0A0B4J2E0 115 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 A0A1B0GX12 115 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 ZNF503-AS2A6NEH8 195 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 TPST1O60507 370 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 HPRP00739 348 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 ADORA3P0DMS8 318 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 HLA-DOBP13765 273 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 MRPL19P49406 292 aaKnown RBP20.12■□□□□ 0.81
TMEM54-201ENST00000329151 EVX1P49640 407 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 RAB1AP62820 205 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 SRSF2Q01130 221 aaKnown RBP20.12■□□□□ 0.81
TMEM54-201ENST00000329151 CCNIQ14094 377 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 GLIPR1L2Q4G1C9 344 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 AGKQ53H12 422 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 PHYHD1Q5SRE7 291 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 PXKQ7Z7A4 578 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 RFLNBQ8N5W9 214 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 DYDC1Q8WWB3 177 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 SLC41A3Q96GZ6 507 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 MS4A3Q96HJ5 214 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 FOXB1Q99853 325 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 TMEM43Q9BTV4 400 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 TMEM38AQ9H6F2 299 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 VAPAQ9P0L0 249 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 SLAMF8Q9P0V8 285 aa20.12■□□□□ 0.81
TMEM54-201ENST00000329151 A0A1W2PPW3 197 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 TMEM129A0AVI4 362 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 C11orf98E9PRG8 122 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 LILRA1O75019 489 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 MT-ATP6P00846 226 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 BGLAPP02818 100 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 GLRXP35754 106 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 GIPRP48546 466 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 AQP5P55064 265 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 SELENOVP59797 346 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 CYP51A1Q16850 503 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 OR5J2Q8NH18 312 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 TXNDC15Q96J42 360 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 SYT3Q9BQG1 590 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 CCDC28BQ9BUN5 200 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 MRPL37Q9BZE1 423 aaKnown RBP20.11■□□□□ 0.81
TMEM54-201ENST00000329151 B3GNT2Q9NY97 397 aa20.11■□□□□ 0.81
TMEM54-201ENST00000329151 HIST1H2ABP04908 130 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 HOXB9P17482 250 aaPredicted RBP20.1■□□□□ 0.81
TMEM54-201ENST00000329151 GPR6P46095 362 aaPredicted RBP20.1■□□□□ 0.81
TMEM54-201ENST00000329151 IDH3AP50213 366 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 CDH12P55289 794 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 CDH15P55291 814 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 BIDP55957 195 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 PAGE3Q5JUK9 113 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 RINLQ6ZS11 566 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 HIST3H2AQ7L7L0 130 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 MSRB3Q8IXL7 192 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 C11orf65Q8NCR3 313 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 HIST1H2ACQ93077 130 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 MOGAT1Q96PD6 335 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 MCHR1Q99705 422 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 SOX7Q9BT81 388 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 RABEP2Q9H5N1 569 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 DUSP13Q9UII6 198 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 GPR160Q9UJ42 338 aa20.1■□□□□ 0.81
TMEM54-201ENST00000329151 ZNF346Q9UL40 294 aaKnown RBP20.1■□□□□ 0.81
TMEM54-201ENST00000329151 LYNX1G3V0Z9 82 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 PLPP3O14495 311 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 FARS2O95363 451 aaKnown RBP20.09■□□□□ 0.81
TMEM54-201ENST00000329151 LYNX1P0DP58 116 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 ZNF14P17017 642 aaPredicted RBP20.09■□□□□ 0.81
TMEM54-201ENST00000329151 TCN1P20061 433 aaPredicted RBP20.09■□□□□ 0.81
TMEM54-201ENST00000329151 IL2RGP31785 369 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 SCGB2A2Q13296 93 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 RIN1Q13671 783 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 TRIP10Q15642 601 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms