RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SLC6A15Q9H2J7 730 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 SERINC1Q9NRX5 453 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 NDUFB11Q9NX14 153 aa16.84■□□□□ 0.29
EXOSC3-201ENST00000327304 BLOC1S5-TXNDC5H3BN57 136 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 ZNF208O43345 1280 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 CD14P08571 375 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 CPEP16870 476 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 ZNF24P17028 368 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 AQP2P41181 271 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 RPS5P46782 204 aaKnown RBP16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 ACSM1Q08AH1 577 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 DGUOKQ16854 277 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 ALG10Q5BKT4 473 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 C1orf140Q5VVS0 124 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 USP43Q70EL4 1123 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 NANOGNBQ7Z5D8 188 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 KLHL36Q8N4N3 616 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 ACBD7Q8N6N7 88 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 ZNF485Q8NCK3 441 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 OR51G2Q8NGK0 314 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 OR6S1Q8NH40 331 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 OR4K13Q8NH42 304 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 MOSPD2Q8NHP6 518 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 ARL5BQ96KC2 179 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 TAAR6Q96RI8 345 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 KATNB1Q9BVA0 655 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 PTDSS2Q9BVG9 487 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 OR51V1Q9H2C8 321 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 ERVK13-1Q9NX77 482 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 QPCTLQ9NXS2 382 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 TUBD1Q9UJT1 453 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 ADAM18Q9Y3Q7 739 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 LIPGQ9Y5X9 500 aa16.83■□□□□ 0.28
EXOSC3-201ENST00000327304 TLN1Q9Y490 2541 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 TXNDC12O95881 172 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 TFPIP10646 304 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 MAP2K6P52564 334 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 GFRA1P56159 465 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 C19orf57Q0VDD7 668 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 EMC4Q5J8M3 183 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 FAM69AQ5T7M9 428 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 FAM122BQ7Z309 247 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 LHFPL3Q86UP9 236 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 EXD3Q8N9H8 876 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 CYB561A3Q8NBI2 242 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 SDR9C7Q8NEX9 313 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 KBTBD8Q8NFY9 601 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 DDIT4LQ96D03 193 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 DDOQ99489 341 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 DEFB127Q9H1M4 99 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 TSPAN10Q9H1Z9 355 aaPredicted RBP16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 ZDHHC11Q9H8X9 412 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 SEC14L4Q9UDX3 406 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 SPIN1Q9Y657 262 aaPredicted RBP16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 PRRC2CQ9Y520 2896 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 TFECO14948 347 aaPredicted RBP16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 OR2T1O43869 369 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 PSMA1P25786 263 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 SDHAP31040 664 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 SFTPDP35247 375 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 SERPINB10P48595 397 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 RPS7P62081 194 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 TPBGQ13641 420 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 GXYLT1Q4G148 440 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 SLC35D3Q5M8T2 416 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 OR2G6Q5TZ20 316 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 MAMDC2Q7Z304 686 aaPredicted RBP16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 PHC2Q8IXK0 858 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 NPEPL1Q8NDH3 523 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 SMPDL3BQ92485 455 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 DCSTAMPQ9H295 470 aa16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 CAB39Q9Y376 341 aaPredicted RBP16.82■□□□□ 0.28
EXOSC3-201ENST00000327304 AHSA1O95433 338 aa16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 SBK2P0C263 348 aa16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 CTXN1P60606 82 aa16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 ERVK-25P63136 954 aa16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 RPL18Q07020 188 aaKnown RBP16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 LGALS3BPQ08380 585 aa16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 GGTLC2Q14390 218 aa16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 SLC10A1Q14973 349 aa16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 TMEM176BQ3YBM2 270 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 TRILQ7L0X0 811 aa16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 SLC25A43Q8WUT9 341 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 CHCHD6Q9BRQ6 235 aa16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 ACKR4Q9NPB9 350 aa16.81■□□□□ 0.28
EXOSC3-201ENST00000327304 USP24Q9UPU5 2620 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 ZNF407Q9C0G0 2248 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 A0A1W2PNR3 127 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 C12orf71A8MTZ7 269 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 STARP49675 285 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 SLC16A1P53985 500 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 RAC1P63000 192 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 SGCBQ16585 318 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 MOGQ16653 247 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 LCN1P1Q5VSP4 162 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 GPR139Q6DWJ6 353 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 TMPRSS11AQ6ZMR5 421 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 GATAD2BQ8WXI9 593 aa16.8■□□□□ 0.28
EXOSC3-201ENST00000327304 PNPLA2Q96AD5 504 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms