RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 AMIGO1Q86WK6 493 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 NAXDQ8IW45 347 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 C9orf40Q8IXQ3 194 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 C2orf73Q8N5S3 287 aaPredicted RBP7.03□□□□□ -1.28
CNOT4-201ENST00000315544 MOSPD2Q8NHP6 518 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 MCHR1Q99705 422 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ZDHHC4Q9NPG8 344 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ASF1AQ9Y294 204 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 ADAM18Q9Y3Q7 739 aa7.03□□□□□ -1.28
CNOT4-201ENST00000315544 NBEAQ8NFP9 2946 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 TRAV27A0A087WT01 109 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ZNF879B4DU55 563 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 H0YGG7 62 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ABCD4O14678 606 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 XRCC3O43542 346 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 AGR2O95994 175 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 TNNI3P19429 210 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 THBS4P35443 961 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ARF3P61204 181 aaPredicted RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 HSF2Q03933 536 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 KCNMB1Q16558 191 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 NTRK2Q16620 822 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 EMC4Q5J8M3 183 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 D2HGDHQ8N465 521 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 OR6N1Q8NGY5 312 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ASB13Q8WXK3 278 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 AKAP1Q92667 903 aaKnown RBP eCLIP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 TMEM230Q96A57 120 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ZNF559Q9BR84 538 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 REPIN1Q9BWE0 567 aaKnown RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 FAM206AQ9NX38 181 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 KLK11Q9UBX7 282 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 TMEM8BA6NDV4 472 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 SLC22A31A6NKX4 558 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ERI3O43414 337 aaKnown RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 IL33O95760 270 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 CSNK2A2P19784 350 aaPredicted RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 CLK1P49759 484 aaKnown RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 RUNX1T1Q06455 604 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 LINC00303Q3SY05 128 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ACSM3Q53FZ2 586 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 FAM89BQ8N5H3 189 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 FANK1Q8TC84 345 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 LIN7BQ9HAP6 207 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 DEC1Q9P2X7 70 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 FLVCR2Q9UPI3 526 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 MRPS18BQ9Y676 258 aaKnown RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 A0A1W2PNV4 684 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 TCRBV16S1A1N1A0A5B0 115 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 LNP1A1A4G5 178 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 LRRN3E7EW58 273 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 GLCEO94923 617 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 CSF2P04141 144 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 HIST1H2ABP04908 130 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 C8orf89P0DMQ9 161 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 SLC25A4P12235 298 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 CELP19835 753 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ZP3P21754 424 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 PAX6P26367 422 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 TALDO1P37837 337 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 HTR2BP41595 481 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 H3F3AP84243 136 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 SSBP1Q04837 148 aaKnown RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 EGR3Q06889 387 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 POU4F2Q12837 409 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ZNF345Q14585 488 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 RTP5Q14D33 572 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 RNPS1Q15287 305 aaKnown RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 STK11Q15831 433 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ZFP69Q49AA0 526 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ZNF776Q68DI1 518 aaPredicted RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 HIST3H2AQ7L7L0 130 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 SDR9C7Q8NEX9 313 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 STOML3Q8TAV4 291 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 TRMT10AQ8TBZ6 339 aaKnown RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 ASB5Q8WWX0 329 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 HIST1H2ACQ93077 130 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 OR1F2PQ96R84 312 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 KCNK17Q96T54 332 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 LRRN3Q9H3W5 708 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 MRPS30Q9NP92 439 aaKnown RBP7.02□□□□□ -1.29
CNOT4-201ENST00000315544 CUTCQ9NTM9 273 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 CALML5Q9NZT1 146 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 TMEM5Q9Y2B1 443 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 SNX8Q9Y5X2 465 aa7.02□□□□□ -1.29
CNOT4-201ENST00000315544 SPTY2D1-AS1A0A0U1RR47 76 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 ANKDD1BA6NHY2 528 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 ACOD1A6NK06 481 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 PCCBP05166 539 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 RPA2P15927 270 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 MAPK3P27361 379 aaPredicted RBP7.01□□□□□ -1.29
CNOT4-201ENST00000315544 CRTC2Q53ET0 693 aaPredicted RBP7.01□□□□□ -1.29
CNOT4-201ENST00000315544 LCN1P1Q5VSP4 162 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 GALNT11Q8NCW6 608 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 Q8NFD4 153 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 RFKQ969G6 155 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 FAM122AQ96E09 287 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 OR14A2Q96R54 314 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 LPAR4Q99677 370 aa7.01□□□□□ -1.29
CNOT4-201ENST00000315544 YIPF4Q9BSR8 244 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms