RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 COA3Q9Y2R0 106 aaPredicted RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 A0A1W2PPH5 198 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 ZNF736B4DX44 427 aaPredicted RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 QDPRP09417 244 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 AKR1D1P51857 326 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 TMBIM6P55061 237 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 ANKRD34AQ69YU3 496 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 GDPD3Q7L5L3 318 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 OR52N5Q8NH56 324 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 SIDT1Q9NXL6 827 aaKnown RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 TRAV17A0A0B4J275 112 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 CD34P28906 385 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 CX3CR1P49238 355 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 BMXP51813 675 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 GABARAPL2P60520 117 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 DPY19L2P2Q6ZN68 376 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 CYP4V2Q6ZWL3 525 aaPredicted RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 CMIPQ8IY22 773 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 FOXRED1Q96CU9 486 aaPredicted RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 TEX37Q96LM6 180 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 SGPP1Q9BX95 441 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 WWTR1Q9GZV5 400 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 HIPK2Q9H2X6 1198 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 DUSP22Q9NRW4 184 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 C5orf49A4QMS7 147 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 RAB3DO95716 219 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 CD14P08571 375 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 TGM4P49221 684 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 Q6ZPB1 254 aaPredicted RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 OR4N2Q8NGD1 307 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 OR13C9Q8NGT0 318 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 CD300LFQ8TDQ1 290 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 ST7LQ8TDW4 575 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 SLC35A4Q96G79 324 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 HRASLSQ9HDD0 168 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 F5H0A9 414 aaPredicted RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 CREBL2O60519 120 aaPredicted RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 LIPCP11150 499 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 RAB31Q13636 194 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 CRMP1Q14194 572 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 SPNS2Q8IVW8 549 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 LIPHQ8WWY8 451 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 LINC00615Q96LM1 132 aaPredicted RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 SELENOIQ9C0D9 397 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 CHST11Q9NPF2 352 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 ENPP5Q9UJA9 477 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 C19orf53Q9UNZ5 99 aaPredicted RBP12.39□□□□□ -0.43
RFFL-201ENST00000315249 ZNF281Q9Y2X9 895 aa12.39□□□□□ -0.43
RFFL-201ENST00000315249 IFNA2P01563 188 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 S100A1P23297 94 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 GIPRP48546 466 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 CAV2P51636 162 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 GPR176Q14439 515 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 Q96M85 177 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 ZNF582Q96NG8 517 aaPredicted RBP12.38□□□□□ -0.43
RFFL-201ENST00000315249 SGCEO43556 437 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 TK1P04183 234 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 PRKACBP22694 351 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 MPEG1Q2M385 716 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 ZNF511Q8NB15 262 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 OR4D9Q8NGE8 314 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 ZNF681Q96N22 645 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 LHPPQ9H008 270 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 TBCCD1Q9NVR7 557 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 GFOD1Q9NXC2 390 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 PIGLQ9Y2B2 252 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 PPICP45877 212 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 VEGFCP49767 419 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 HLCSP50747 726 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 CLN3Q13286 438 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 EMG1Q92979 244 aaKnown RBP12.38□□□□□ -0.43
RFFL-201ENST00000315249 GHRLQ9UBU3 117 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 TUBG1P23258 451 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 FKBP2P26885 142 aaKnown RBP12.38□□□□□ -0.43
RFFL-201ENST00000315249 RPS23P62266 143 aaKnown RBP12.38□□□□□ -0.43
RFFL-201ENST00000315249 RUNX2Q13950 521 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 BRIX1Q8TDN6 353 aaKnown RBP12.38□□□□□ -0.43
RFFL-201ENST00000315249 CSF3RQ99062 836 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 MOKQ9UQ07 419 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 CKAP5Q14008 2032 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 MYO16Q9Y6X6 1858 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 CD300LBA8K4G0 201 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 MT-ATP6P00846 226 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 PCBP4P57723 403 aaKnown RBP12.38□□□□□ -0.43
RFFL-201ENST00000315249 ARHGAP11BQ3KRB8 267 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 PTRH1Q86Y79 214 aaKnown RBP12.38□□□□□ -0.43
RFFL-201ENST00000315249 TMEM185AQ8NFB2 350 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 OR2A1Q8NGT9 310 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 PKMYT1Q99640 499 aa12.38□□□□□ -0.43
RFFL-201ENST00000315249 RBMS3Q6XE24 437 aaKnown RBP12.37□□□□□ -0.43
RFFL-201ENST00000315249 OR6F1Q8NGZ6 308 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 ZNF420Q8TAQ5 688 aaPredicted RBP12.37□□□□□ -0.43
RFFL-201ENST00000315249 PIGTQ969N2 578 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 PRMT8Q9NR22 394 aaPredicted RBP12.37□□□□□ -0.43
RFFL-201ENST00000315249 TP53P04637 393 aaPredicted RBP12.37□□□□□ -0.43
RFFL-201ENST00000315249 ACP2P11117 423 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 HLA-DMAP28067 261 aa12.37□□□□□ -0.43
RFFL-201ENST00000315249 INTS12Q96CB8 462 aaKnown RBP12.37□□□□□ -0.43
RFFL-201ENST00000315249 PAQR5Q9NXK6 330 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms