RNA–Protein interactions for RNA: ENST00000311308.6

TTC9B-201, Transcript of tetratricopeptide repeat domain 9B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9B, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9B-201ENST00000311308 OR10A6Q8NH74 314 aa17.52■□□□□ 0.4
TTC9B-201ENST00000311308 ZNF837Q96EG3 531 aaPredicted RBP17.52■□□□□ 0.4
TTC9B-201ENST00000311308 WFDC6Q9BQY6 131 aa17.52■□□□□ 0.4
TTC9B-201ENST00000311308 ZNF385DQ9H6B1 395 aa17.52■□□□□ 0.4
TTC9B-201ENST00000311308 LPAR3Q9UBY5 353 aa17.52■□□□□ 0.4
TTC9B-201ENST00000311308 SPEF1Q9Y4P9 236 aa17.52■□□□□ 0.4
TTC9B-201ENST00000311308 CHD3Q12873 2000 aaKnown RBP17.52■□□□□ 0.39
TTC9B-201ENST00000311308 CPSF4LA6NMK7 179 aaKnown RBP17.51■□□□□ 0.39
TTC9B-201ENST00000311308 hCG_2039718K7EN88 272 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 SEC14L2O76054 403 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 HIST1H2ABP04908 130 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 CSNK1A1P48729 337 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 DAG1Q14118 895 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 SELPLGQ14242 412 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 HIST3H2AQ7L7L0 130 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 CXXC5Q7LFL8 322 aaKnown RBP17.51■□□□□ 0.39
TTC9B-201ENST00000311308 SPATA21Q7Z572 469 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 RETREG3Q86VR2 466 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 VANGL1Q8TAA9 524 aaPredicted RBP17.51■□□□□ 0.39
TTC9B-201ENST00000311308 ADAMTS16Q8TE57 1224 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 HIST1H2ACQ93077 130 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 TXNDC15Q96J42 360 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 MPP4Q96JB8 637 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 DENND2DQ9H6A0 471 aaPredicted RBP17.51■□□□□ 0.39
TTC9B-201ENST00000311308 SEC61A2Q9H9S3 476 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 DYNLRB1Q9NP97 96 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 NANSQ9NR45 359 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 TMEM160Q9NX00 188 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 FBXL3Q9UKT7 428 aa17.51■□□□□ 0.39
TTC9B-201ENST00000311308 TRAPPC13A5PLN9 417 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 LRRN3E7EW58 273 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 C11orf98E9PRG8 122 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 RAB36O95755 333 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 CD247P20963 164 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 THBS4P35443 961 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 NR4A2P43354 598 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 HGFACQ04756 655 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 SNTB2Q13425 540 aaKnown RBP17.5■□□□□ 0.39
TTC9B-201ENST00000311308 TRMT5Q32P41 509 aaKnown RBP17.5■□□□□ 0.39
TTC9B-201ENST00000311308 IQCCQ4KMZ1 466 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 PHYHD1Q5SRE7 291 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 LINC00114Q6XXX2 140 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 ANKS4BQ8N8V4 417 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 GPR32P1Q8NGA4 272 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 SPATA3Q8NHX4 192 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 NEU4Q8WWR8 484 aaPredicted RBP17.5■□□□□ 0.39
TTC9B-201ENST00000311308 FOXB1Q99853 325 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 BEX2Q9BXY8 128 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 SLC19A3Q9BZV2 496 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 NOX3Q9HBY0 568 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 CMAHPQ9Y471 501 aa17.5■□□□□ 0.39
TTC9B-201ENST00000311308 RNF13O43567 381 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 UBL3O95164 117 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 HLA-HP01893 362 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 FAM157CP0CG43 387 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 TROVE2P10155 538 aaKnown RBP eCLIP17.49■□□□□ 0.39
TTC9B-201ENST00000311308 LSP1P33241 339 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 BIDP55957 195 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 ZNF74Q16587 644 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 VMACQ2NL98 169 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 MMEL1Q495T6 779 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 ZNF627Q7L945 461 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 ZNF229Q9UJW7 825 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 SLC7A7Q9UM01 511 aa17.49■□□□□ 0.39
TTC9B-201ENST00000311308 ZNF503-AS2A6NEH8 195 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 VWC2LB2RUY7 222 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 CH25HO95992 272 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 IGHV4-31P0DP07 118 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 UMPSP11172 480 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 APEHP13798 732 aaKnown RBP17.48■□□□□ 0.39
TTC9B-201ENST00000311308 IFNGR1P15260 489 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 B4GALT1P15291 398 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 ZNF16P17020 682 aaPredicted RBP17.48■□□□□ 0.39
TTC9B-201ENST00000311308 RPS23P62266 143 aaKnown RBP17.48■□□□□ 0.39
TTC9B-201ENST00000311308 GALK2Q01415 458 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 PIGFQ07326 219 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 ZP4Q12836 540 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 NPTX1Q15818 432 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 KRT80Q6KB66 452 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 SLC35D2Q76EJ3 337 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 MYPOPQ86VE0 399 aaPredicted RBP17.48■□□□□ 0.39
TTC9B-201ENST00000311308 SVOPLQ8N434 492 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 OR6X1Q8NH79 312 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 TAMM41Q96BW9 452 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 FOXN4Q96NZ1 517 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 ECSITQ9BQ95 431 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 SHARPINQ9H0F6 387 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 PCDHAC1Q9H158 963 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 B3GNT2Q9NY97 397 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 BAG5Q9UL15 447 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 KCNS2Q9ULS6 477 aa17.48■□□□□ 0.39
TTC9B-201ENST00000311308 KPNA4O00629 521 aaPredicted RBP17.47■□□□□ 0.39
TTC9B-201ENST00000311308 LMX1BO60663 402 aa17.47■□□□□ 0.39
TTC9B-201ENST00000311308 NPPAP01160 153 aa17.47■□□□□ 0.39
TTC9B-201ENST00000311308 IFNA14P01570 189 aa17.47■□□□□ 0.39
TTC9B-201ENST00000311308 NR4A1P22736 598 aa17.47■□□□□ 0.39
TTC9B-201ENST00000311308 PTDSS1P48651 473 aaKnown RBP17.47■□□□□ 0.39
TTC9B-201ENST00000311308 RAB1AP62820 205 aa17.47■□□□□ 0.39
TTC9B-201ENST00000311308 MAPRE2Q15555 327 aa17.47■□□□□ 0.39
TTC9B-201ENST00000311308 COQ5Q5HYK3 327 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms