RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 OR1E2P47887 323 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 UBE2NP61088 152 aaKnown RBP17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 CAMK2DQ13557 499 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 CARD17Q5XLA6 110 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 TTC33Q6PID6 262 aaPredicted RBP17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 DEPDC4Q8N2C3 294 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 PCYOX1LQ8NBM8 494 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 OR10H5Q8NGA6 315 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 RP9Q8TA86 221 aaKnown RBP17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 SLC26A7Q8TE54 656 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 HTRA1Q92743 480 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 TMEM54Q969K7 222 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 REG4Q9BYZ8 158 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 ZNF229Q9UJW7 825 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 BAG5Q9UL15 447 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 SVEP1Q4LDE5 3571 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 IGHV4-30-2A0A087WSY4 118 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 C11orf98E9PRG8 122 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 COX4I1P13073 169 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 LSM11P83369 360 aaKnown RBP eCLIP17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 IL1RL1Q01638 556 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 PIN1Q13526 163 aaPredicted RBP17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 CYBRD1Q53TN4 286 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 MDP1Q86V88 176 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 MICU2Q8IYU8 434 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 C10orf53Q8N6V4 93 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 OR2T12Q8NG77 320 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 PFN4Q8NHR9 129 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 TMEM255BQ8WV15 326 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 PROX1Q92786 737 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 BARX1Q9HBU1 254 aaPredicted RBP17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 NANSQ9NR45 359 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 CA10Q9NS85 328 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 C20orf141Q9NUB4 165 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 GID8Q9NWU2 228 aa17.2■□□□□ 0.34
PDZRN3-202ENST00000308537 NME4O00746 187 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 DYNC1I1O14576 645 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 SERPINI2O75830 405 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 OR5F1O95221 314 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 IGF2P01344 180 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 MT-ND1P03886 318 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 AHCYP23526 432 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 ADIPOQQ15848 244 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 SLC35D2Q76EJ3 337 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 OR6X1Q8NH79 312 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 LIPHQ8WWY8 451 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 HS6ST2Q96MM7 605 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 SEPHS2Q99611 448 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 POLR2J2Q9GZM3 115 aaKnown RBP17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 POLR2J3Q9H1A7 115 aaKnown RBP17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 MYLK2Q9H1R3 596 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 RIMS3Q9UJD0 308 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 A4GNTQ9UNA3 340 aa17.19■□□□□ 0.34
PDZRN3-202ENST00000308537 IGHV2OR16-5A0A0B4J2B6 119 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 ELOVL7A1L3X0 281 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 SSX4O60224 188 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 IGFBP1P08833 259 aaPredicted RBP17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 RBM34P42696 430 aaKnown RBP17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 IDH3GP51553 393 aaPredicted RBP17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 BIDP55957 195 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 SELENOWP63302 87 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 MSMPQ1L6U9 139 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 LRRC23Q53EV4 343 aaPredicted RBP17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 LRFN4Q6PJG9 635 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 DEF8Q6ZN54 512 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 MAN2C1Q9NTJ4 1040 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 SNX13Q9Y5W8 968 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 CUBNO60494 3623 aa17.18■□□□□ 0.34
PDZRN3-202ENST00000308537 LY6HO94772 140 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 HLA-HP01893 362 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 CRYAAP02489 173 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 PGA4P0DJD7 388 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 PGA3P0DJD8 388 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 B4GALT1P15291 398 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 ZNF14P17017 642 aaPredicted RBP17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 ARR3P36575 388 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 CSNK1A1P48729 337 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 RUNX1T1Q06455 604 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 RPL18Q07020 188 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 MELKQ14680 651 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 HIST3H3Q16695 136 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 TSEN54Q7Z6J9 526 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 VTCN1Q7Z7D3 282 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 CCDC36Q8IYA8 594 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 ZNF525Q8N782 197 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 NUP37Q8NFH4 326 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 FGFBP3Q8TAT2 258 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 NANOS1Q8WY41 292 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 FBXO17Q96EF6 278 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 MS4A3Q96HJ5 214 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 ADAD1Q96M93 576 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 FOXB1Q99853 325 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 ULBP2Q9BZM5 246 aa17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 MOV10Q9HCE1 1003 aaKnown RBP17.17■□□□□ 0.34
PDZRN3-202ENST00000308537 DNHD1Q96M86 4753 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 ATRQ13535 2644 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 TMEM129A0AVI4 362 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 ZNF726A6NNF4 738 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 INAFM1C9JVW0 142 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 FFAR1O14842 300 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms