RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 C1GALT1Q9NS00 363 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 NXT1Q9UKK6 140 aaKnown RBP12.47□□□□□ -0.41
TRIM56-201ENST00000306085 NAV1Q8NEY1 1877 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 ABCD4O14678 606 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 LDB3O75112 727 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 AGFG1P52594 562 aaKnown RBP12.47□□□□□ -0.41
TRIM56-201ENST00000306085 FAM162BQ5T6X4 162 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 FA2HQ7L5A8 372 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 ZC3HAV1LQ96H79 300 aaKnown RBP12.47□□□□□ -0.41
TRIM56-201ENST00000306085 A0A1W2PQU0 124 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 CDCA2Q69YH5 1023 aaPredicted RBP12.47□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF620Q6ZNG0 422 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 MEPCEQ7L2J0 689 aaKnown RBP12.47□□□□□ -0.41
TRIM56-201ENST00000306085 IRF2BP1Q8IU81 584 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 TRIB3Q96RU7 358 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 VAPAQ9P0L0 249 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 LHX6Q9UPM6 363 aa12.47□□□□□ -0.41
TRIM56-201ENST00000306085 A0A1W2PPH5 198 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 CDC14CA4D256 554 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 CEBPDP49716 269 aaPredicted RBP12.46□□□□□ -0.41
TRIM56-201ENST00000306085 NHLH1Q02575 133 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 NHLH2Q02577 135 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 UTP4Q969X6 686 aaKnown RBP12.46□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF768Q9H5H4 540 aaKnown RBP12.46□□□□□ -0.41
TRIM56-201ENST00000306085 SLC22A7Q9Y694 548 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 TRBV11-1A0A0K0K1C0 115 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 TNFSF8P32971 234 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 DOC2BQ14184 412 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 CLEC12BQ2HXU8 276 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 FIGLAQ6QHK4 219 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 RHOUQ7L0Q8 258 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 AMIGO3Q86WK7 504 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 FIBINQ8TAL6 211 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 SLX4Q8IY92 1834 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 HS3ST1O14792 307 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 CCKARP32238 428 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 ADAMTS14Q8WXS8 1223 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 EMC7Q9NPA0 242 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 RNF150Q9ULK6 438 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 APEX1P27695 318 aaKnown RBP12.46□□□□□ -0.41
TRIM56-201ENST00000306085 GDNFP39905 211 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 ETV6P41212 452 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 FAM110CQ1W6H9 321 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 SLC16A14Q7RTX9 510 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 KIRREL1Q96J84 757 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 HRASLS5Q96KN8 279 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 ADOQ96SZ5 270 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 HTR2CP28335 458 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 RGNQ15493 299 aa12.46□□□□□ -0.41
TRIM56-201ENST00000306085 SLC6A12P48065 614 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 MANEALQ5VSG8 457 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 OR2T2Q6IF00 324 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 NRARPQ7Z6K4 114 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 INPP5EQ9NRR6 644 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 ARPC3O15145 178 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 MRPL33O75394 65 aaKnown RBP12.46□□□□□ -0.42
TRIM56-201ENST00000306085 REEP5Q00765 189 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 PAFAH1B3Q15102 231 aaKnown RBP12.46□□□□□ -0.42
TRIM56-201ENST00000306085 WBP2NLQ6ICG8 309 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 AKR7LQ8NHP1 331 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 PINX1Q96BK5 328 aaKnown RBP12.46□□□□□ -0.42
TRIM56-201ENST00000306085 GPR78Q96P69 363 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 MENTQ9BUN1 341 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 B3GAT1Q9P2W7 334 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 PLSCR1O15162 318 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 LAMTOR5O43504 91 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 Q6ZTK2 550 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 DTWD2Q8NBA8 298 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 PIGMQ9H3S5 423 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 ZMAT3Q9HA38 289 aaKnown RBP12.46□□□□□ -0.42
TRIM56-201ENST00000306085 EMC9Q9Y3B6 208 aa12.46□□□□□ -0.42
TRIM56-201ENST00000306085 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.42
TRIM56-201ENST00000306085 ENDOGQ14249 297 aaKnown RBP12.45□□□□□ -0.42
TRIM56-201ENST00000306085 COL13A1Q5TAT6 717 aaPredicted RBP12.45□□□□□ -0.42
TRIM56-201ENST00000306085 B3GNT8Q7Z7M8 397 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 C14orf80Q86SX3 495 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 CDC20BQ86Y33 519 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 ULBP2Q9BZM5 246 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 ZNF443Q9Y2A4 671 aaPredicted RBP12.45□□□□□ -0.42
TRIM56-201ENST00000306085 CEP170BQ9Y4F5 1589 aaPredicted RBP12.45□□□□□ -0.42
TRIM56-201ENST00000306085 GABRB3P28472 473 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 RNASEKQ6P5S7 137 aaKnown RBP12.45□□□□□ -0.42
TRIM56-201ENST00000306085 OR2A1Q8NGT9 310 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 ATP13A2Q9NQ11 1180 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 OR52A1Q9UKL2 312 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 PTRH2Q9Y3E5 179 aaKnown RBP12.45□□□□□ -0.42
TRIM56-201ENST00000306085 A0A1W2PPQ1 181 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 RGS11O94810 467 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 PTGER1P34995 402 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 GDPD3Q7L5L3 318 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 BATF2Q8N1L9 274 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 ANKRD60Q9BZ19 345 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 MRPS28Q9Y2Q9 187 aaKnown RBP12.45□□□□□ -0.42
TRIM56-201ENST00000306085 ZNF727A8MUV8 499 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 CFHP08603 1231 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 SERTAD2Q14140 314 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 RTL8BQ17RB0 113 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 PXDC1Q5TGL8 231 aa12.45□□□□□ -0.42
TRIM56-201ENST00000306085 EMG1Q92979 244 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms