RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 RAB3DO95716 219 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 HLA-DQA2P01906 255 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 POU3F4P49335 361 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 PABPC1L2AQ5JQF8 200 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 OR10K2Q6IF99 312 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 SPAG16Q8N0X2 631 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 OR5T3Q8NGG3 340 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 SMARCD2Q92925 531 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 KLHDC2Q9Y2U9 406 aa13.4□□□□□ -0.26
COL6A2-201ENST00000300527 PRSS44E7EML9 344 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 F13BP05160 661 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 OR4E1P0C645 316 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 CD34P28906 385 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 CCKBRP32239 447 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 AKR1C3P42330 323 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 CAPZA1P52907 286 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 H3F3CQ6NXT2 135 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 LRRC69Q6ZNQ3 347 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 ERN2Q76MJ5 926 aaKnown RBP13.39□□□□□ -0.27
COL6A2-201ENST00000300527 RAB11FIP2Q7L804 512 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 CCDC36Q8IYA8 594 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 SYS1Q8N2H4 156 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 PLPP7Q8NBV4 271 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 OR4N2Q8NGD1 307 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 FGF13Q92913 245 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 ALG12Q9BV10 488 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 C14orf105Q9NVL8 296 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 RASL12Q9NYN1 266 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 ATG2BQ96BY7 2078 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 TRAV20A0A0B4J274 112 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 RFPL4AA6NLU0 287 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 RFPL4AL1F8VTS6 287 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 H7C417 338 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 AQP8O94778 261 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 TLX1P31314 330 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-201ENST00000300527 VIPR2P41587 438 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 RAB13P51153 203 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 RBM39Q14498 530 aaKnown RBP13.39□□□□□ -0.27
COL6A2-201ENST00000300527 PLPP4Q5VZY2 271 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 JAZF1Q86VZ6 243 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 OR2L13Q8N349 312 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 FBXO17Q96EF6 278 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 OR2S2Q9NQN1 319 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 ZMAT5Q9UDW3 170 aaKnown RBP13.39□□□□□ -0.27
COL6A2-201ENST00000300527 MTFP1Q9UDX5 166 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 DPP7Q9UHL4 492 aa13.39□□□□□ -0.27
COL6A2-201ENST00000300527 SGCEO43556 437 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 SULT1B1O43704 296 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 GPRIN2O60269 458 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 HLA-AP01891 365 aaKnown RBP13.38□□□□□ -0.27
COL6A2-201ENST00000300527 SPP1P10451 314 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 MGMTP16455 207 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 NFYBP25208 207 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 CMPK1P30085 196 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 DIO1P49895 249 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 ATP1B3P54709 279 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 Q499Y3 187 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 PRSS41Q7RTY9 318 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 SLC35F3Q8IY50 421 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 LCN9Q8WX39 176 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 MRPL48Q96GC5 212 aaKnown RBP13.38□□□□□ -0.27
COL6A2-201ENST00000300527 ZNF254O75437 659 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 DCNP07585 359 aaKnown RBP13.38□□□□□ -0.27
COL6A2-201ENST00000300527 RHOP08100 348 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 CSF1P09603 554 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 SRSF3P84103 164 aaKnown RBP13.38□□□□□ -0.27
COL6A2-201ENST00000300527 SNTB1Q13884 538 aaKnown RBP13.38□□□□□ -0.27
COL6A2-201ENST00000300527 POMGNT2Q8NAT1 580 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 MKKSQ9NPJ1 570 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-201ENST00000300527 FAM96BQ9Y3D0 163 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 SNRNP200O75643 2136 aaKnown RBP13.38□□□□□ -0.27
COL6A2-201ENST00000300527 TRPM6Q9BX84 2022 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 C5orf51A6NDU8 294 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 GGT3PA6NGU5 568 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 OR6C76A6NM76 312 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 ABCD4O14678 606 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 ADH5P11766 374 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 EPCAMP16422 314 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 P2RY2P41231 377 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 ZIC1Q15915 447 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 TMEM205Q6UW68 189 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 SVBPQ8N300 66 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 GTPBP8Q8N3Z3 284 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-201ENST00000300527 OR5T2Q8NGG2 359 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 PPP1R14AQ96A00 147 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 BIN3Q9NQY0 253 aa13.38□□□□□ -0.27
COL6A2-201ENST00000300527 FITM1A5D6W6 292 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 SULT1C2O00338 296 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 ALOX12BO75342 701 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 AGR2O95994 175 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 RD3LP0DJH9 198 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 RPA2P15927 270 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 PBX2P40425 430 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 PRMT2P55345 433 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 MRPS10P82664 201 aaKnown RBP13.37□□□□□ -0.27
COL6A2-201ENST00000300527 IL10RAQ13651 578 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 RUNX2Q13950 521 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 KIRREL2Q6UWL6 708 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 GALNT16Q8N428 558 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 OR4S1Q8NGB4 309 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms